Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr04

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 360


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES4041 Chr04 22059490 1e-113
CaES4068 Chr04 3758036 1e-126
CaES4080 Chr04 6720689 1e-140
CaES4090 Chr04 21210912 1e-149
CaES4101 Chr04 215395173 3e-99
CaES4126 Chr04 5532867 1e-113
CaES4144 Chr04 11038228 1e-144
CaES4146 Chr04 188288439 1e-101
CaES4165 Chr04 201698440 1e-152
CaES4172 Chr04 15316629 8e-97
CaES4176 Chr04 200373414 4e-66
CaES4178 Chr04 152144501 1e-138
CaES4180 Chr04 198239254 1e-138
CaES4181 Chr04 33081350 1e-109
CaES4195 Chr04 487170 1e-104
CaES4230 Chr04 74655294 1e-135
CaES4258 Chr04 2058262 1e-126
CaES4283 Chr04 105439920 2e-86
CaES4322 Chr04 18295795 1e-137
CaES4330 Chr04 31848132 1e-134
CaES4355 Chr04 11550620 1e-124
CaES4363 Chr04 17520100 1e-33
CaES4371 Chr04 23582505 4e-76
CaES4426 Chr04 189290194 2e-73
CaES4433 Chr04 467729 5e-63
CaES4513 Chr04 188034861 2e-75
CaES4528 Chr04 20687002 1e-106
CaES4576 Chr04 19194404 1e-78
CaES4580 Chr04 20209619 1e-136
CaES4604 Chr04 56303980 1e-117
CaES4627 Chr04 29344699 1e-105
CaES4649 Chr04 156507071 2e-69
CaES4686 Chr04 392447 1e-122
CaES4720 Chr04 78715106 4e-59
CaES4725 Chr04 97275042 2e-90
CaES4735 Chr04 207924467 1e-107
CaES4744 Chr04 23920985 4e-86
CaES4746 Chr04 3896750 1e-136
CaES4764 Chr04 66398260 2e-89
CaES4778 Chr04 157073577 1e-116
CaES4817 Chr04 13920116 1e-142
CaES4822 Chr04 23359298 1e-137
CaES4840 Chr04 191786062 1e-138
CaES4843 Chr04 14911074 1e-143
CaES4863 Chr04 2058066 1e-131
CaES4866 Chr04 60949724 9e-90
CaES4880 Chr04 104620115 1e-159
CaES4883 0.307 180 Chr04 215624125 2e-80
CaES4890 Chr04 173446109 2e-92
CaES4910 Chr04 9117528 1e-127
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 360


MarkerDB | Capsicum annuum