Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr04

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 360


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES3680 0.0 191 Chr04 54422102 9e-94
CaES0242 Chr04 55144039 7e-92
CaES4604 Chr04 56303980 1e-117
CaES1622 Chr04 57857475 1e-121
CaES3946 Chr04 58221749 1e-121
CaES5173 Chr04 58643631 1e-133
CaES3498 Chr04 58972528 1e-63
CaES2120 Chr04 59659260 1e-153
CaES4866 Chr04 60949724 9e-90
CaES3803 Chr04 61422495 1e-70
CaES3359 Chr04 63847104 1e-105
CaES1442 Chr04 64736727 4e-86
CaES4764 Chr04 66398260 2e-89
CaES2682 Chr04 66798696 4e-90
CaES0795 Chr04 67591055 3e-65
CaES0560 Chr04 68475772 2e-21
CaES5062 Chr04 69533622 1e-108
CaES2513 0.0 192 Chr04 70840366 2e-69
CaES2619 Chr04 70847370 1e-138
CaES3003 Chr04 72607859 1e-110
CaES2022 Chr04 72608282 5e-69
CaES2140 Chr04 74387440 1e-103
CaES1670 Chr04 74387440 3e-55
CaES4230 Chr04 74655294 1e-135
CaES0390 Chr04 74666253 8e-95
CaES2782 Chr04 74688062 1e-153
CaES5130 Chr04 74706462 1e-155
CaES3582 Chr04 74707297 7e-62
CaES4720 Chr04 78715106 4e-59
CaES2800 Chr04 85944783 7e-95
CaES0919 Chr04 87225218 4e-39
CaES5183 0.0 192 Chr04 87564074 1e-151
CaES5022 Chr04 90388506 1e-145
CaES4725 Chr04 97275042 2e-90
CaES5252 Chr04 97275443 1e-89
CaES2746 Chr04 102082569 2e-90
CaES1991 Chr04 103856786 1e-139
CaES3740 Chr04 104619362 1e-135
CaES4880 Chr04 104620115 1e-159
CaES4283 Chr04 105439920 2e-86
CaES3440 Chr04 119980306 1e-121
CaES5277 Chr04 121613029 3e-85
CaES3248 Chr04 123001374 1e-105
CaES0918 Chr04 131770889 1e-25
CaES2187 Chr04 132359211 1e-140
CaES5124 Chr04 132360800 1e-88
CaES3620 Chr04 132702344 1e-133
CaES2793 Chr04 133492993 1e-141
CaES2543 Chr04 134708162 5e-39
CaES4952 Chr04 134975286 7e-91
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 360

MarkerDB | Capsicum annuum