Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr04

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 360


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES2351 Chr04 21339431 1e-145
CaES2387 Chr04 52163005 6e-50
CaES2399 Chr04 1872630 8e-72
CaES2428 Chr04 175934073 1e-134
CaES2431 Chr04 145970866 1e-115
CaES2481 Chr04 5152803 1e-126
CaES2487 Chr04 15516718 1e-103
CaES2488 Chr04 21530314 1e-100
CaES2512 Chr04 207828143 5e-79
CaES2513 0.0 192 Chr04 70840366 2e-69
CaES2514 Chr04 201671447 1e-123
CaES2518 Chr04 12226302 2e-78
CaES2528 Chr04 583335 5e-93
CaES2543 Chr04 134708162 5e-39
CaES2595 Chr04 173885960 1e-138
CaES2606 Chr04 211413174 1e-131
CaES2610 Chr04 8984956 1e-147
CaES2612 Chr04 164188520 1e-132
CaES2619 Chr04 70847370 1e-138
CaES2656 Chr04 7759821 1e-130
CaES2676 Chr04 139804716 1e-138
CaES2682 Chr04 66798696 4e-90
CaES2701 Chr04 200359973 4e-56
CaES2705 Chr04 8047024 1e-152
CaES2716 Chr04 201679892 1e-137
CaES2746 Chr04 102082569 2e-90
CaES2750 Chr04 4686212 1e-140
CaES2767 Chr04 176884787 1e-118
CaES2782 Chr04 74688062 1e-153
CaES2793 Chr04 133492993 1e-141
CaES2800 Chr04 85944783 7e-95
CaES2821 Chr04 10104553 2e-76
CaES2833 Chr04 5885747 3e-92
CaES2837 Chr04 21450583 5e-73
CaES2870 Chr04 211783961 1e-101
CaES2903 Chr04 211868505 1e-123
CaES2956 Chr04 52780558 6e-83
CaES2992 Chr04 213377912 1e-119
CaES3000 Chr04 150025133 1e-136
CaES3003 Chr04 72607859 1e-110
CaES3033 Chr04 9064698 1e-102
CaES3133 Chr04 207636585 1e-125
CaES3142 Chr04 5885901 1e-114
CaES3148 Chr04 11697442 1e-112
CaES3155 Chr04 27743780 1e-147
CaES3209 Chr04 150305480 1e-120
CaES3216 Chr04 7698118 4e-34
CaES3224 Chr04 504205 8e-73
CaES3235 Chr04 6080009 9e-39
CaES3245 Chr04 139803461 1e-119
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 360


MarkerDB | Capsicum annuum