Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr04

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 360


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES2821 Chr04 10104553 2e-76
CaES3752 Chr04 10178372 1e-122
CaES5135 Chr04 10335664 1e-106
CaES0648 Chr04 10338078 1e-125
CaES1219 Chr04 10772078 2e-71
CaES4144 Chr04 11038228 1e-144
CaES1269 Chr04 11466409 1e-140
CaES4355 Chr04 11550620 1e-124
CaES1860 Chr04 11696095 4e-90
CaES3148 Chr04 11697442 1e-112
CaES5188 Chr04 11722382 5e-88
CaES1702 Chr04 11834853 1e-111
CaES2518 Chr04 12226302 2e-78
CaES0188 Chr04 12459706 2e-84
CaES3726 Chr04 12521221 1e-100
CaES1886 Chr04 13898100 1e-30
CaES5480 Chr04 13899744 6e-57
CaES0382 Chr04 13901048 1e-124
CaES4817 Chr04 13920116 1e-142
CaES1210 Chr04 13954240 1e-114
CaES0975 Chr04 14475447 1e-131
CaES2204 Chr04 14531893 1e-112
CaES4843 Chr04 14911074 1e-143
CaES4172 Chr04 15316629 8e-97
CaES1658 Chr04 15472035 1e-92
CaES0728 Chr04 15472581 1e-153
CaES2487 Chr04 15516718 1e-103
CaES2113 Chr04 16106642 2e-97
CaES0479 Chr04 16322831 1e-80
CaES5202 Chr04 17201357 1e-119
CaES5406 Chr04 17465070 1e-54
CaES1062 Chr04 17514052 1e-103
CaES4363 Chr04 17520100 1e-33
CaES4322 Chr04 18295795 1e-137
CaES0832 Chr04 18373128 5e-29
CaES4932 Chr04 18462473 1e-131
CaES5245 Chr04 18463163 5e-78
CaES4576 Chr04 19194404 1e-78
CaES1827 Chr04 19215028 3e-97
CaES4580 Chr04 20209619 1e-136
CaES4528 Chr04 20687002 1e-106
CaES4090 Chr04 21210912 1e-149
CaES2351 Chr04 21339431 1e-145
CaES2837 Chr04 21450583 5e-73
CaES0927 Chr04 21451932 6e-99
CaES2488 Chr04 21530314 1e-100
CaES5599 Chr04 22019579 2e-81
CaES1890 Chr04 22021869 5e-69
CaES5257 Chr04 22058566 2e-57
CaES4041 Chr04 22059490 1e-113
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 360

MarkerDB | Capsicum annuum