Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr04

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 360


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES1702 Chr04 11834853 1e-111
CaES1743 Chr04 5401944 1e-112
CaES1775 Chr04 500182 2e-92
CaES1779 Chr04 199225749 3e-94
CaES1825 Chr04 6662683 4e-53
CaES1827 Chr04 19215028 3e-97
CaES1847 Chr04 489731 1e-136
CaES1860 Chr04 11696095 4e-90
CaES1870 Chr04 44010389 1e-116
CaES1874 Chr04 166685402 1e-79
CaES1886 Chr04 13898100 1e-30
CaES1888 Chr04 5717473 5e-73
CaES1890 Chr04 22021869 5e-69
CaES1897 Chr04 22299990 5e-43
CaES1900 Chr04 215067713 1e-134
CaES1938 Chr04 184734384 1e-101
CaES1947 Chr04 1004803 1e-138
CaES1948 Chr04 7720322 1e-119
CaES1953 Chr04 6784424 1e-98
CaES1972 Chr04 145973075 7e-63
CaES1979 Chr04 39991350 1e-135
CaES1991 Chr04 103856786 1e-139
CaES2015 Chr04 208158593 1e-115
CaES2020 Chr04 804140 8e-68
CaES2021 Chr04 214618274 1e-93
CaES2022 Chr04 72608282 5e-69
CaES2036 Chr04 8525747 1e-110
CaES2060 Chr04 199653724 4e-60
CaES2065 Chr04 1323627 1e-142
CaES2070 Chr04 5805485 9e-99
CaES2073 Chr04 184773803 7e-74
CaES2077 Chr04 32793654 2e-96
CaES2113 Chr04 16106642 2e-97
CaES2118 Chr04 213722503 1e-134
CaES2120 Chr04 59659260 1e-153
CaES2130 Chr04 204781336 1e-109
CaES2140 Chr04 74387440 1e-103
CaES2167 Chr04 2131533 1e-116
CaES2187 Chr04 132359211 1e-140
CaES2201 Chr04 41256347 1e-106
CaES2204 Chr04 14531893 1e-112
CaES2210 0.0 0 Chr04 199648063 9e-78
CaES2224 Chr04 8145058 1e-129
CaES2242 Chr04 169210886 1e-141
CaES2247 Chr04 2192125 1e-129
CaES2251 Chr04 154695167 9e-37
CaES2298 Chr04 834482 2e-73
CaES2302 Chr04 208167933 1e-116
CaES2318 Chr04 28441905 4e-64
CaES2319 Chr04 8528779 1e-106
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 360

MarkerDB | Capsicum annuum