Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr04

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 360


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES2481 Chr04 5152803 1e-126
CaES0839 Chr04 5253041 3e-51
CaES0335 Chr04 5255811 1e-74
CaES1743 Chr04 5401944 1e-112
CaES4126 Chr04 5532867 1e-113
CaES3863 Chr04 5551459 1e-111
CaES0471 Chr04 5717383 1e-140
CaES1888 Chr04 5717473 5e-73
CaES2070 Chr04 5805485 9e-99
CaES1434 Chr04 5877025 1e-109
CaES2833 Chr04 5885747 3e-92
CaES3142 Chr04 5885901 1e-114
CaES3235 Chr04 6080009 9e-39
CaES1367 Chr04 6655069 1e-84
CaES1825 Chr04 6662683 4e-53
CaES3644 Chr04 6707681 1e-137
CaES4080 Chr04 6720689 1e-140
CaES1953 Chr04 6784424 1e-98
CaES3626 Chr04 7137174 1e-100
CaES5046 Chr04 7343508 1e-45
CaES3216 Chr04 7698118 4e-34
CaES1948 Chr04 7720322 1e-119
CaES2656 Chr04 7759821 1e-130
CaES1505 Chr04 7792876 2e-80
CaES1694 Chr04 7875723 1e-121
CaES5112 Chr04 7896182 1e-90
CaES5126 Chr04 7896182 1e-113
CaES2705 Chr04 8047024 1e-152
CaES2224 Chr04 8145058 1e-129
CaES0341 Chr04 8344608 1e-114
CaES0519 Chr04 8474044 1e-109
CaES0447 Chr04 8482341 1e-109
CaES2036 Chr04 8525747 1e-110
CaES2319 Chr04 8528779 1e-106
CaES0438 Chr04 8614728 1e-120
CaES5199 Chr04 8634676 4e-91
CaES0186 Chr04 8851073 2e-99
CaES0348 Chr04 8929543 3e-71
CaES0216 Chr04 8976370 2e-77
CaES2610 Chr04 8984956 1e-147
CaES0685 Chr04 8986151 1e-110
CaES3033 Chr04 9064698 1e-102
CaES4910 Chr04 9117528 1e-127
CaES0050 Chr04 9357401 1e-145
CaES3460 Chr04 9379788 1e-125
CaES1055 Chr04 9385890 1e-112
CaES1386 Chr04 9392632 1e-155
CaES3822 Chr04 9556111 1e-114
CaES1211 Chr04 9831534 1e-100
CaES3852 Chr04 9860510 1e-120
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 360

MarkerDB | Capsicum annuum