Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr04

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 360


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES0841 Chr04 51840724 9e-78
CaES0849 Chr04 188464090 1e-118
CaES0852 Chr04 213425466 1e-52
CaES0884 Chr04 23921553 1e-111
CaES0893 Chr04 146035102 1e-135
CaES0917 Chr04 28051395 1e-116
CaES0918 Chr04 131770889 1e-25
CaES0919 Chr04 87225218 4e-39
CaES0927 Chr04 21451932 6e-99
CaES0956 Chr04 804140 5e-68
CaES0974 Chr04 215540031 1e-114
CaES0975 Chr04 14475447 1e-131
CaES1055 Chr04 9385890 1e-112
CaES1062 Chr04 17514052 1e-103
CaES1089 Chr04 147575592 6e-48
CaES1091 Chr04 205557547 1e-119
CaES1112 0.499 190 Chr04 305084 1e-124
CaES1166 Chr04 23371445 1e-123
CaES1205 Chr04 23920475 3e-90
CaES1210 Chr04 13954240 1e-114
CaES1211 Chr04 9831534 1e-100
CaES1213 Chr04 33069785 1e-121
CaES1219 Chr04 10772078 2e-71
CaES1232 Chr04 3932988 1e-117
CaES1235 Chr04 43648200 1e-118
CaES1256 Chr04 198651731 1e-123
CaES1269 Chr04 11466409 1e-140
CaES1271 Chr04 206422166 4e-42
CaES1310 Chr04 2352431 1e-135
CaES1314 Chr04 167079777 1e-125
CaES1321 Chr04 5152713 1e-136
CaES1344 Chr04 43113400 3e-35
CaES1367 Chr04 6655069 1e-84
CaES1386 Chr04 9392632 1e-155
CaES1392 Chr04 184774511 1e-34
CaES1409 Chr04 44524933 1e-70
CaES1424 Chr04 36800051 1e-140
CaES1433 Chr04 201014848 1e-123
CaES1434 Chr04 5877025 1e-109
CaES1442 Chr04 64736727 4e-86
CaES1451 Chr04 186931478 1e-115
CaES1505 Chr04 7792876 2e-80
CaES1600 Chr04 188461946 4e-43
CaES1613 Chr04 207711705 1e-116
CaES1616 Chr04 38252077 2e-88
CaES1622 Chr04 57857475 1e-121
CaES1645 Chr04 2232626 3e-89
CaES1658 Chr04 15472035 1e-92
CaES1670 Chr04 74387440 3e-55
CaES1694 Chr04 7875723 1e-121
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 360


MarkerDB | Capsicum annuum