Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr03

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 651


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES4946 0.0 0 Chr03 2190291 2e-82
CaES1189 0.0 0 Chr03 25160925 1e-123
CaES3856 0.0 78 Chr03 246550299 1e-134
CaES5178 0.306 172 Chr03 214053229 1e-125
CaES0663 0.461 180 Chr03 12635558 1e-102
CaES1838 0.011 182 Chr03 29344 1e-139
CaES2655 0.704 189 Chr03 248643219 1e-157
CaES0404 0.321 190 Chr03 40604139 1e-107
CaES2505 0.288 192 Chr03 124652149 1e-105
CaES0492 Chr03 95825 8e-82
CaES3558 Chr03 227435 1e-111
CaES2249 Chr03 245441 1e-102
CaES1639 Chr03 258868 1e-105
CaES0807 Chr03 465158 3e-92
CaES3078 Chr03 504905 1e-132
CaES5265 Chr03 506268 2e-95
CaES4121 Chr03 616124 2e-97
CaES1347 Chr03 639687 5e-71
CaES1426 Chr03 677972 1e-111
CaES0343 Chr03 783926 2e-78
CaES0158 Chr03 784430 1e-131
CaES5006 Chr03 823834 2e-99
CaES0395 Chr03 863233 1e-140
CaES5550 Chr03 863437 1e-110
CaES0156 Chr03 894281 1e-125
CaES3827 Chr03 897593 1e-128
CaES5659 Chr03 964227 1e-150
CaES3063 Chr03 964428 1e-164
CaES5293 Chr03 990092 1e-111
CaES5191 Chr03 1097884 1e-105
CaES2284 Chr03 1177313 1e-146
CaES3231 Chr03 1193753 1e-109
CaES2761 Chr03 1231501 1e-137
CaES1791 Chr03 1233220 1e-113
CaES2527 Chr03 1233564 3e-97
CaES3528 Chr03 1279803 1e-100
CaES3381 Chr03 1306337 2e-42
CaES5747 Chr03 1306436 1e-68
CaES1520 Chr03 1338359 1e-144
CaES4804 Chr03 1339245 1e-117
CaES3091 Chr03 1425384 2e-65
CaES3674 Chr03 1429748 1e-150
CaES3490 Chr03 1496716 1e-107
CaES2756 Chr03 1499812 1e-82
CaES4555 Chr03 1520994 1e-77
CaES3741 Chr03 1766540 1e-121
CaES5697 Chr03 1882467 5e-78
CaES1643 Chr03 1922359 1e-149
CaES3838 Chr03 1923143 1e-121
CaES0808 Chr03 2016625 6e-74
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 651

MarkerDB | Capsicum annuum