Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr03

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 651


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES3776 Chr03 240774900 7e-80
CaES3777 Chr03 232878744 1e-154
CaES3792 Chr03 123690156 5e-94
CaES3799 Chr03 248146101 3e-46
CaES3806 Chr03 251295382 1e-119
CaES3815 Chr03 7089363 1e-127
CaES3817 Chr03 50928190 1e-118
CaES3818 Chr03 228695872 1e-116
CaES3820 Chr03 247431367 1e-143
CaES3827 Chr03 897593 1e-128
CaES3830 Chr03 253544835 1e-154
CaES3836 Chr03 35747725 1e-106
CaES3838 Chr03 1923143 1e-121
CaES3839 Chr03 5084911 1e-143
CaES3856 0.0 78 Chr03 246550299 1e-134
CaES3867 Chr03 228694693 1e-144
CaES3874 Chr03 201155789 1e-130
CaES3883 Chr03 25088248 2e-73
CaES3885 Chr03 245453977 5e-97
CaES3892 Chr03 49004993 1e-81
CaES3894 Chr03 98428997 1e-112
CaES3900 Chr03 256201488 1e-100
CaES3910 Chr03 11404845 2e-46
CaES3911 Chr03 34004732 1e-144
CaES3915 Chr03 6291610 1e-115
CaES3920 Chr03 12295323 2e-81
CaES3929 Chr03 39531838 1e-35
CaES3931 Chr03 41498742 1e-141
CaES3944 Chr03 28488333 1e-127
CaES3953 Chr03 4953938 6e-89
CaES3971 Chr03 241924826 1e-117
CaES3992 Chr03 18412335 1e-114
CaES4008 Chr03 10054221 6e-89
CaES4016 Chr03 30273797 1e-104
CaES4033 Chr03 6210265 1e-129
CaES4050 Chr03 41361540 6e-33
CaES4061 Chr03 41836357 1e-120
CaES4066 Chr03 12371103 8e-29
CaES4069 Chr03 244863376 2e-84
CaES4073 Chr03 20421948 1e-132
CaES4085 Chr03 3978680 1e-107
CaES4095 Chr03 6503429 1e-140
CaES4096 Chr03 209701849 4e-34
CaES4121 Chr03 616124 2e-97
CaES4123 Chr03 18908039 1e-79
CaES4142 Chr03 12632673 1e-121
CaES4149 Chr03 39902625 1e-101
CaES4156 Chr03 218699285 1e-125
CaES4157 Chr03 7771933 2e-85
CaES4168 Chr03 6101601 2e-79
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 651

MarkerDB | Capsicum annuum