Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr03

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 651


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES3892 Chr03 49004993 1e-81
CaES2442 Chr03 49568732 7e-98
CaES3039 Chr03 49832669 7e-59
CaES2823 Chr03 50737045 3e-73
CaES3569 Chr03 50886446 1e-100
CaES3817 Chr03 50928190 1e-118
CaES0420 Chr03 51935229 1e-141
CaES5374 Chr03 52121649 9e-71
CaES5027 Chr03 52713562 3e-45
CaES3404 Chr03 52878976 8e-47
CaES4399 Chr03 53030474 1e-103
CaES5402 Chr03 53031167 3e-65
CaES2266 Chr03 53031441 1e-142
CaES0712 Chr03 53401395 2e-90
CaES3249 Chr03 53707675 3e-89
CaES2469 Chr03 54123394 1e-60
CaES5018 Chr03 54259139 1e-131
CaES1487 Chr03 54736420 1e-118
CaES0096 Chr03 54808413 5e-65
CaES5198 Chr03 54876704 2e-54
CaES5023 Chr03 55486732 1e-139
CaES1725 Chr03 55988879 1e-110
CaES2765 Chr03 56229644 1e-113
CaES3059 Chr03 58165464 6e-95
CaES2963 Chr03 59294005 1e-144
CaES4749 Chr03 59885317 1e-119
CaES5419 Chr03 61543559 1e-56
CaES0973 Chr03 62164323 1e-121
CaES4557 Chr03 62197045 1e-129
CaES5490 Chr03 62908202 1e-72
CaES0789 Chr03 63434408 1e-141
CaES1206 Chr03 64112013 1e-108
CaES1385 Chr03 64119130 3e-66
CaES2818 Chr03 64420271 1e-140
CaES3458 Chr03 65310862 1e-137
CaES0976 Chr03 70814784 1e-145
CaES3319 Chr03 71600052 3e-37
CaES3520 Chr03 72940357 1e-132
CaES0556 Chr03 73387528 1e-139
CaES4643 Chr03 78432169 7e-65
CaES0212 Chr03 79024479 1e-117
CaES5543 Chr03 81648477 1e-42
CaES5638 Chr03 83606706 1e-121
CaES2895 Chr03 84940771 1e-126
CaES0675 Chr03 85710049 2e-54
CaES0877 Chr03 87492470 9e-97
CaES4647 Chr03 90696339 1e-129
CaES3486 Chr03 91607738 1e-110
CaES5699 Chr03 93064138 2e-87
CaES2991 Chr03 93207224 1e-143
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 651

MarkerDB | Capsicum annuum