Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr03

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 651


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES3361 Chr03 100671102 1e-41
CaES3367 Chr03 252190956 1e-116
CaES3381 Chr03 1306337 2e-42
CaES3391 Chr03 217767091 1e-102
CaES3397 Chr03 23187674 1e-111
CaES3398 Chr03 222735735 1e-102
CaES3403 Chr03 22737517 1e-128
CaES3404 Chr03 52878976 8e-47
CaES3409 Chr03 12798098 1e-144
CaES3414 Chr03 237430871 1e-138
CaES3421 Chr03 12039818 1e-130
CaES3426 Chr03 19910802 2e-92
CaES3432 Chr03 3913430 1e-112
CaES3458 Chr03 65310862 1e-137
CaES3467 Chr03 258321127 1e-96
CaES3472 Chr03 24940838 1e-96
CaES3480 Chr03 261186420 6e-76
CaES3483 Chr03 248934155 6e-90
CaES3486 Chr03 91607738 1e-110
CaES3490 Chr03 1496716 1e-107
CaES3508 Chr03 35429928 3e-60
CaES3520 Chr03 72940357 1e-132
CaES3522 Chr03 196398933 1e-112
CaES3528 Chr03 1279803 1e-100
CaES3537 Chr03 245559026 3e-58
CaES3546 Chr03 36553123 1e-54
CaES3549 Chr03 164387069 1e-141
CaES3558 Chr03 227435 1e-111
CaES3565 Chr03 245067504 1e-168
CaES3566 Chr03 222734793 1e-103
CaES3569 Chr03 50886446 1e-100
CaES3576 Chr03 253480756 9e-85
CaES3585 Chr03 8409989 1e-122
CaES3600 Chr03 239084205 1e-126
CaES3604 Chr03 6101336 1e-117
CaES3605 Chr03 20083552 1e-105
CaES3607 Chr03 10477481 2e-69
CaES3616 Chr03 18686297 1e-124
CaES3618 Chr03 35411510 2e-95
CaES3632 Chr03 237997367 1e-126
CaES3674 Chr03 1429748 1e-150
CaES3679 Chr03 9369096 1e-106
CaES3682 Chr03 12724819 5e-95
CaES3685 Chr03 249128703 1e-148
CaES3703 Chr03 11244380 1e-122
CaES3713 Chr03 159448267 1e-113
CaES3719 Chr03 12595658 1e-139
CaES3741 Chr03 1766540 1e-121
CaES3753 Chr03 249833673 1e-104
CaES3769 Chr03 257498615 1e-109
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 651

MarkerDB | Capsicum annuum