Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr03

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 651


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES2918 Chr03 7686588 1e-101
CaES2923 Chr03 174469384 1e-159
CaES2927 Chr03 245716273 1e-141
CaES2941 Chr03 34562910 1e-115
CaES2963 Chr03 59294005 1e-144
CaES2967 Chr03 259017119 1e-103
CaES2991 Chr03 93207224 1e-143
CaES3011 Chr03 242534621 1e-124
CaES3015 Chr03 254102770 1e-123
CaES3022 Chr03 47147261 4e-97
CaES3025 Chr03 10951924 3e-22
CaES3026 Chr03 3695045 1e-125
CaES3036 Chr03 224117329 1e-149
CaES3037 Chr03 41827755 1e-133
CaES3039 Chr03 49832669 7e-59
CaES3040 Chr03 2945160 1e-149
CaES3051 Chr03 251787174 4e-82
CaES3059 Chr03 58165464 6e-95
CaES3063 Chr03 964428 1e-164
CaES3066 Chr03 134044049 1e-130
CaES3068 Chr03 5955100 1e-103
CaES3072 Chr03 27972268 5e-84
CaES3078 Chr03 504905 1e-132
CaES3081 Chr03 222794011 1e-109
CaES3083 Chr03 228108225 1e-112
CaES3084 Chr03 210141784 1e-146
CaES3088 Chr03 29914810 1e-61
CaES3091 Chr03 1425384 2e-65
CaES3092 Chr03 98428273 1e-136
CaES3102 Chr03 222079276 1e-142
CaES3113 Chr03 195446849 1e-126
CaES3151 Chr03 9481865 1e-146
CaES3194 Chr03 9323004 6e-44
CaES3204 Chr03 3393152 7e-97
CaES3208 Chr03 12500032 1e-119
CaES3210 Chr03 15756545 1e-152
CaES3222 Chr03 22856361 1e-51
CaES3225 Chr03 210459612 4e-81
CaES3228 Chr03 113285139 1e-140
CaES3231 Chr03 1193753 1e-109
CaES3234 Chr03 253744488 1e-155
CaES3249 Chr03 53707675 3e-89
CaES3263 Chr03 261253775 6e-55
CaES3287 Chr03 222735025 2e-58
CaES3319 Chr03 71600052 3e-37
CaES3322 Chr03 248609739 8e-57
CaES3328 Chr03 102372366 8e-60
CaES3329 Chr03 36143739 1e-36
CaES3341 Chr03 11952740 1e-114
CaES3349 Chr03 12515578 6e-84
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 651

MarkerDB | Capsicum annuum