Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr03

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 651


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES2394 Chr03 117472550 2e-51
CaES2419 Chr03 242764412 1e-108
CaES2442 Chr03 49568732 7e-98
CaES2444 Chr03 28290349 1e-75
CaES2451 Chr03 38591297 1e-59
CaES2456 Chr03 251349801 4e-73
CaES2457 Chr03 243880960 4e-57
CaES2466 Chr03 246364630 4e-81
CaES2469 Chr03 54123394 1e-60
CaES2471 Chr03 241605466 6e-68
CaES2495 Chr03 153980703 6e-31
CaES2505 0.288 192 Chr03 124652149 1e-105
CaES2526 Chr03 2557099 5e-78
CaES2527 Chr03 1233564 3e-97
CaES2546 Chr03 5720646 2e-84
CaES2549 Chr03 17295513 1e-143
CaES2560 Chr03 253618095 4e-69
CaES2574 Chr03 10772102 1e-143
CaES2578 Chr03 33626155 1e-130
CaES2591 Chr03 164959758 1e-112
CaES2618 Chr03 233783314 1e-117
CaES2627 Chr03 26997540 1e-120
CaES2633 Chr03 5874656 1e-157
CaES2635 Chr03 8279787 1e-136
CaES2648 Chr03 174312121 1e-122
CaES2655 0.704 189 Chr03 248643219 1e-157
CaES2660 Chr03 38848601 1e-137
CaES2671 Chr03 33707697 1e-30
CaES2678 Chr03 253484174 1e-138
CaES2684 Chr03 15835887 1e-134
CaES2687 Chr03 237964155 1e-141
CaES2689 Chr03 260347431 1e-126
CaES2693 Chr03 27961512 1e-58
CaES2733 Chr03 236034103 7e-93
CaES2737 Chr03 20465523 1e-165
CaES2739 Chr03 2771355 5e-93
CaES2740 Chr03 29681858 1e-106
CaES2756 Chr03 1499812 1e-82
CaES2761 Chr03 1231501 1e-137
CaES2765 Chr03 56229644 1e-113
CaES2803 Chr03 222731414 1e-106
CaES2805 Chr03 249344363 1e-138
CaES2818 Chr03 64420271 1e-140
CaES2823 Chr03 50737045 3e-73
CaES2866 Chr03 253295131 1e-125
CaES2876 Chr03 114030570 1e-115
CaES2879 Chr03 17738595 1e-129
CaES2893 Chr03 30874862 3e-99
CaES2895 Chr03 84940771 1e-126
CaES2916 Chr03 10922227 1e-105
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 651

MarkerDB | Capsicum annuum