Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr03

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 651


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES1872 Chr03 8393854 1e-119
CaES1875 Chr03 236779379 3e-29
CaES1876 Chr03 247430571 2e-82
CaES1878 Chr03 233188012 3e-45
CaES1882 Chr03 98040812 1e-100
CaES1912 Chr03 4517492 1e-114
CaES1915 Chr03 24968468 2e-81
CaES1927 Chr03 258129031 1e-126
CaES1942 Chr03 30667554 1e-119
CaES1945 Chr03 5893640 2e-65
CaES1946 Chr03 231901990 2e-91
CaES1949 Chr03 259758259 1e-162
CaES1954 Chr03 33390709 1e-120
CaES1958 Chr03 258085804 2e-78
CaES1959 Chr03 35621644 1e-125
CaES1963 Chr03 232351417 5e-92
CaES1974 Chr03 12169888 1e-122
CaES1998 Chr03 48359277 1e-138
CaES1999 Chr03 231830901 1e-103
CaES2006 Chr03 230391531 2e-51
CaES2009 Chr03 16810108 1e-104
CaES2038 Chr03 245067747 1e-106
CaES2051 Chr03 7840996 1e-118
CaES2094 Chr03 34704234 1e-94
CaES2101 Chr03 233310527 1e-110
CaES2134 Chr03 232576028 1e-144
CaES2144 Chr03 11932779 1e-133
CaES2151 Chr03 118397043 1e-141
CaES2156 Chr03 34051032 6e-98
CaES2180 Chr03 16658971 4e-98
CaES2185 Chr03 34684531 1e-102
CaES2199 Chr03 233027777 3e-82
CaES2206 Chr03 134278424 1e-172
CaES2235 Chr03 99461713 1e-139
CaES2245 Chr03 253730649 1e-107
CaES2249 Chr03 245441 1e-102
CaES2266 Chr03 53031441 1e-142
CaES2282 Chr03 4555913 2e-84
CaES2284 Chr03 1177313 1e-146
CaES2292 Chr03 247185921 1e-133
CaES2301 Chr03 34556420 1e-139
CaES2308 Chr03 243862309 1e-105
CaES2310 Chr03 137326591 1e-101
CaES2348 Chr03 2948186 1e-65
CaES2355 Chr03 27221500 1e-125
CaES2358 Chr03 2295788 1e-122
CaES2361 Chr03 15198168 1e-109
CaES2363 Chr03 216447139 1e-121
CaES2368 Chr03 2451372 5e-30
CaES2371 Chr03 2203876 3e-62
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 651

MarkerDB | Capsicum annuum