Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr03

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 651


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES1450 Chr03 2204790 4e-73
CaES1457 Chr03 207810928 1e-121
CaES1464 Chr03 226399968 2e-87
CaES1471 Chr03 229466036 7e-99
CaES1475 Chr03 246733836 2e-85
CaES1487 Chr03 54736420 1e-118
CaES1497 Chr03 229801086 4e-92
CaES1502 Chr03 39178304 2e-66
CaES1512 Chr03 30850998 3e-95
CaES1513 Chr03 233567860 2e-47
CaES1514 Chr03 33312845 3e-82
CaES1520 Chr03 1338359 1e-144
CaES1523 Chr03 3868459 5e-98
CaES1526 Chr03 224350369 1e-115
CaES1532 Chr03 140041469 8e-44
CaES1533 Chr03 247168894 2e-69
CaES1543 Chr03 233310101 7e-87
CaES1549 Chr03 7451316 3e-31
CaES1563 Chr03 204183045 2e-42
CaES1581 Chr03 252090870 6e-35
CaES1593 Chr03 207989408 1e-106
CaES1594 Chr03 260220904 2e-54
CaES1603 Chr03 196398391 1e-110
CaES1615 Chr03 19408926 2e-97
CaES1621 Chr03 27994744 1e-123
CaES1624 Chr03 2025768 1e-121
CaES1638 Chr03 20265551 1e-129
CaES1639 Chr03 258868 1e-105
CaES1643 Chr03 1922359 1e-149
CaES1655 Chr03 14909556 1e-117
CaES1664 Chr03 6299181 1e-64
CaES1685 Chr03 24239711 1e-115
CaES1688 Chr03 254384716 5e-95
CaES1699 Chr03 260345907 1e-102
CaES1700 Chr03 8852449 1e-121
CaES1710 Chr03 222736525 1e-126
CaES1722 Chr03 29541224 1e-133
CaES1725 Chr03 55988879 1e-110
CaES1729 Chr03 10065941 1e-110
CaES1731 Chr03 38567182 9e-80
CaES1735 Chr03 107623319 2e-80
CaES1769 Chr03 9245723 1e-103
CaES1771 Chr03 146727452 1e-70
CaES1776 Chr03 12287368 4e-43
CaES1791 Chr03 1233220 1e-113
CaES1804 Chr03 223216978 1e-68
CaES1812 Chr03 233267185 1e-113
CaES1838 0.011 182 Chr03 29344 1e-139
CaES1841 Chr03 22735900 1e-72
CaES1843 Chr03 42401537 1e-144
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 651


MarkerDB | Capsicum annuum