Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr03

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 651


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES2546 Chr03 5720646 2e-84
CaES2633 Chr03 5874656 1e-157
CaES1945 Chr03 5893640 2e-65
CaES4411 Chr03 5950244 7e-75
CaES3068 Chr03 5955100 1e-103
CaES0339 Chr03 6062392 1e-111
CaES3604 Chr03 6101336 1e-117
CaES4168 Chr03 6101601 2e-79
CaES5351 Chr03 6138277 1e-104
CaES4033 Chr03 6210265 1e-129
CaES3915 Chr03 6291610 1e-115
CaES1664 Chr03 6299181 1e-64
CaES4095 Chr03 6503429 1e-140
CaES0996 Chr03 6591965 6e-50
CaES0911 Chr03 6593008 1e-121
CaES5689 Chr03 6742877 6e-99
CaES0232 Chr03 6752786 1e-123
CaES4232 Chr03 6802325 1e-130
CaES5250 Chr03 6807645 3e-78
CaES3815 Chr03 7089363 1e-127
CaES1275 Chr03 7405113 1e-162
CaES1549 Chr03 7451316 3e-31
CaES4607 Chr03 7686564 4e-80
CaES2918 Chr03 7686588 1e-101
CaES4157 Chr03 7771933 2e-85
CaES5165 Chr03 7774874 0.0
CaES4441 Chr03 7833292 1e-119
CaES2051 Chr03 7840996 1e-118
CaES5034 Chr03 8268909 1e-101
CaES2635 Chr03 8279787 1e-136
CaES1872 Chr03 8393854 1e-119
CaES3585 Chr03 8409989 1e-122
CaES5570 Chr03 8441079 3e-45
CaES5606 Chr03 8532332 1e-147
CaES0284 Chr03 8547333 1e-117
CaES1700 Chr03 8852449 1e-121
CaES4819 Chr03 9240240 7e-91
CaES1769 Chr03 9245723 1e-103
CaES5445 Chr03 9273203 3e-62
CaES5324 Chr03 9281948 2e-75
CaES1193 Chr03 9322635 1e-128
CaES3194 Chr03 9323004 6e-44
CaES3679 Chr03 9369096 1e-106
CaES3151 Chr03 9481865 1e-146
CaES5036 Chr03 9665269 1e-149
CaES1343 Chr03 9667542 3e-96
CaES5739 Chr03 9699818 4e-87
CaES4827 Chr03 9826397 1e-131
CaES5187 Chr03 9954712 1e-118
CaES4008 Chr03 10054221 6e-89
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 651


MarkerDB | Capsicum annuum