Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr03

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 651


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES0829 Chr03 99650491 3e-64
CaES0835 Chr03 12276785 8e-76
CaES0837 Chr03 258087098 2e-58
CaES0851 Chr03 253806570 1e-129
CaES0868 Chr03 219942240 2e-89
CaES0870 Chr03 16630725 4e-45
CaES0877 Chr03 87492470 9e-97
CaES0898 Chr03 254102056 1e-125
CaES0901 Chr03 97964624 1e-149
CaES0911 Chr03 6593008 1e-121
CaES0929 Chr03 14839261 1e-117
CaES0941 Chr03 25419242 1e-112
CaES0973 Chr03 62164323 1e-121
CaES0976 Chr03 70814784 1e-145
CaES0986 Chr03 24407009 1e-153
CaES0996 Chr03 6591965 6e-50
CaES1022 Chr03 18815340 1e-122
CaES1030 Chr03 246237577 1e-114
CaES1045 Chr03 4164601 1e-128
CaES1056 Chr03 19326720 1e-133
CaES1073 Chr03 196205240 1e-111
CaES1107 Chr03 4785937 1e-157
CaES1117 Chr03 2485245 1e-105
CaES1119 Chr03 196225758 1e-54
CaES1171 Chr03 233087438 1e-159
CaES1186 Chr03 234382646 1e-101
CaES1189 0.0 0 Chr03 25160925 1e-123
CaES1190 Chr03 10975530 1e-112
CaES1193 Chr03 9322635 1e-128
CaES1196 Chr03 230390011 1e-119
CaES1206 Chr03 64112013 1e-108
CaES1234 Chr03 232880123 1e-137
CaES1270 Chr03 20145313 5e-48
CaES1275 Chr03 7405113 1e-162
CaES1282 Chr03 3785126 1e-122
CaES1292 Chr03 2294809 1e-109
CaES1295 Chr03 259701549 1e-103
CaES1298 Chr03 20333912 1e-129
CaES1307 Chr03 36547297 9e-70
CaES1323 Chr03 4351935 1e-38
CaES1331 Chr03 40000536 1e-104
CaES1338 Chr03 2350801 6e-95
CaES1340 Chr03 98588832 1e-147
CaES1343 Chr03 9667542 3e-96
CaES1347 Chr03 639687 5e-71
CaES1385 Chr03 64119130 3e-66
CaES1416 Chr03 47835281 1e-105
CaES1419 Chr03 17357208 1e-93
CaES1426 Chr03 677972 1e-111
CaES1439 Chr03 39146023 1e-141
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 651


MarkerDB | Capsicum annuum