Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr03

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 651


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES4566 Chr03 2021879 1e-132
CaES1624 Chr03 2025768 1e-121
CaES4728 Chr03 2190018 1e-112
CaES2371 Chr03 2203876 3e-62
CaES1450 Chr03 2204790 4e-73
CaES5342 Chr03 2293883 1e-89
CaES1292 Chr03 2294809 1e-109
CaES2358 Chr03 2295788 1e-122
CaES4826 Chr03 2330898 1e-105
CaES1338 Chr03 2350801 6e-95
CaES5528 Chr03 2427909 9e-42
CaES2368 Chr03 2451372 5e-30
CaES1117 Chr03 2485245 1e-105
CaES2526 Chr03 2557099 5e-78
CaES4786 Chr03 2767491 2e-90
CaES2739 Chr03 2771355 5e-93
CaES0664 Chr03 2790386 4e-67
CaES4690 Chr03 2790515 1e-134
CaES3040 Chr03 2945160 1e-149
CaES5309 Chr03 2945557 8e-44
CaES2348 Chr03 2948186 1e-65
CaES3204 Chr03 3393152 7e-97
CaES3026 Chr03 3695045 1e-125
CaES1282 Chr03 3785126 1e-122
CaES5225 Chr03 3790610 1e-105
CaES1523 Chr03 3868459 5e-98
CaES4424 Chr03 3912650 3e-81
CaES3432 Chr03 3913430 1e-112
CaES4815 Chr03 3928676 1e-131
CaES0079 Chr03 3957728 1e-115
CaES4721 Chr03 3977101 1e-115
CaES4085 Chr03 3978680 1e-107
CaES5541 Chr03 4006717 4e-90
CaES1045 Chr03 4164601 1e-128
CaES4715 Chr03 4164799 1e-107
CaES4899 Chr03 4301428 7e-22
CaES0125 Chr03 4303227 1e-109
CaES1323 Chr03 4351935 1e-38
CaES0527 Chr03 4354530 5e-70
CaES1912 Chr03 4517492 1e-114
CaES2282 Chr03 4555913 2e-84
CaES0225 Chr03 4720109 1e-108
CaES4897 Chr03 4731573 8e-83
CaES1107 Chr03 4785937 1e-157
CaES3953 Chr03 4953938 6e-89
CaES4200 Chr03 5012559 1e-100
CaES3839 Chr03 5084911 1e-143
CaES0064 Chr03 5509000 1e-94
CaES5214 Chr03 5538852 2e-64
CaES0371 Chr03 5547898 4e-96
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 651

MarkerDB | Capsicum annuum