Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr03

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 651


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES0385 Chr03 234377433 4e-91
CaES0389 Chr03 45541389 1e-137
CaES0395 Chr03 863233 1e-140
CaES0403 Chr03 20453393 1e-135
CaES0404 0.321 190 Chr03 40604139 1e-107
CaES0411 Chr03 33424081 1e-47
CaES0420 Chr03 51935229 1e-141
CaES0423 Chr03 245072501 1e-150
CaES0424 Chr03 226404380 6e-86
CaES0429 Chr03 252071793 1e-46
CaES0431 Chr03 43731979 1e-121
CaES0433 Chr03 36143607 1e-147
CaES0455 Chr03 38523066 1e-108
CaES0469 Chr03 44184186 1e-169
CaES0492 Chr03 95825 8e-82
CaES0498 Chr03 15840824 2e-68
CaES0517 Chr03 229470907 8e-57
CaES0518 Chr03 107750367 2e-58
CaES0527 Chr03 4354530 5e-70
CaES0544 Chr03 207387769 1e-92
CaES0556 Chr03 73387528 1e-139
CaES0559 Chr03 253177715 3e-25
CaES0563 Chr03 143422575 3e-80
CaES0566 Chr03 34623272 2e-43
CaES0573 Chr03 246541583 2e-25
CaES0579 Chr03 39477304 3e-61
CaES0630 Chr03 14662290 1e-125
CaES0649 Chr03 253121011 1e-120
CaES0663 0.461 180 Chr03 12635558 1e-102
CaES0664 Chr03 2790386 4e-67
CaES0675 Chr03 85710049 2e-54
CaES0681 Chr03 16814984 1e-57
CaES0692 Chr03 17486489 1e-118
CaES0710 Chr03 241827273 1e-115
CaES0712 Chr03 53401395 2e-90
CaES0724 Chr03 39108043 1e-142
CaES0730 Chr03 41444509 1e-116
CaES0737 Chr03 16624483 1e-133
CaES0749 Chr03 40884494 1e-160
CaES0777 Chr03 253753458 1e-146
CaES0785 Chr03 233912615 1e-79
CaES0789 Chr03 63434408 1e-141
CaES0802 Chr03 217398177 1e-100
CaES0807 Chr03 465158 3e-92
CaES0808 Chr03 2016625 6e-74
CaES0814 Chr03 29531589 7e-93
CaES0820 Chr03 28290002 2e-97
CaES0821 Chr03 14909035 1e-92
CaES0825 Chr03 168658771 1e-103
CaES0826 Chr03 226476755 3e-71
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 651


MarkerDB | Capsicum annuum