Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr03

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 651


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES4984 Chr03 195225001 1e-114
CaES5000 Chr03 232740914 1e-108
CaES5006 Chr03 823834 2e-99
CaES5018 Chr03 54259139 1e-131
CaES5023 Chr03 55486732 1e-139
CaES5027 Chr03 52713562 3e-45
CaES5034 Chr03 8268909 1e-101
CaES5035 Chr03 226053265 1e-141
CaES5036 Chr03 9665269 1e-149
CaES5048 Chr03 27131237 2e-74
CaES5052 Chr03 134832715 1e-144
CaES5073 Chr03 22848685 1e-109
CaES5093 Chr03 38563964 1e-137
CaES5094 Chr03 236116676 1e-140
CaES5097 Chr03 128171154 1e-137
CaES5120 Chr03 12271279 1e-165
CaES5141 Chr03 157457559 3e-53
CaES5146 Chr03 247977557 1e-95
CaES5147 Chr03 246734143 5e-45
CaES5158 Chr03 244316926 2e-98
CaES5165 Chr03 7774874 0.0
CaES5169 Chr03 118036528 1e-148
CaES5178 0.306 172 Chr03 214053229 1e-125
CaES5187 Chr03 9954712 1e-118
CaES5191 Chr03 1097884 1e-105
CaES5193 Chr03 103841336 1e-155
CaES5198 Chr03 54876704 2e-54
CaES5214 Chr03 5538852 2e-64
CaES5225 Chr03 3790610 1e-105
CaES5230 Chr03 20025400 1e-108
CaES5250 Chr03 6807645 3e-78
CaES5256 Chr03 20428006 1e-47
CaES5259 Chr03 101959679 1e-155
CaES5265 Chr03 506268 2e-95
CaES5272 Chr03 36466060 9e-96
CaES5273 Chr03 41359213 4e-75
CaES5275 Chr03 18633794 2e-49
CaES5286 Chr03 256259977 1e-88
CaES5293 Chr03 990092 1e-111
CaES5306 Chr03 244543015 1e-88
CaES5309 Chr03 2945557 8e-44
CaES5320 Chr03 107623271 2e-56
CaES5324 Chr03 9281948 2e-75
CaES5333 Chr03 211728730 1e-118
CaES5334 Chr03 14463490 6e-53
CaES5336 Chr03 253144170 1e-101
CaES5342 Chr03 2293883 1e-89
CaES5347 Chr03 39063758 8e-31
CaES5351 Chr03 6138277 1e-104
CaES5374 Chr03 52121649 9e-71
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 651

MarkerDB | Capsicum annuum