Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr03

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 651


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES4607 Chr03 7686564 4e-80
CaES4614 Chr03 227101642 1e-115
CaES4634 Chr03 96700221 1e-111
CaES4636 Chr03 229658366 1e-143
CaES4643 Chr03 78432169 7e-65
CaES4644 Chr03 11050468 1e-119
CaES4647 Chr03 90696339 1e-129
CaES4651 Chr03 244532731 1e-146
CaES4674 Chr03 235410320 1e-139
CaES4685 Chr03 32537561 1e-105
CaES4688 Chr03 238853433 1e-66
CaES4690 Chr03 2790515 1e-134
CaES4699 Chr03 195902421 1e-42
CaES4702 Chr03 203601144 5e-95
CaES4703 Chr03 212598033 1e-123
CaES4715 Chr03 4164799 1e-107
CaES4721 Chr03 3977101 1e-115
CaES4728 Chr03 2190018 1e-112
CaES4733 Chr03 39149397 1e-130
CaES4749 Chr03 59885317 1e-119
CaES4750 Chr03 119168269 7e-96
CaES4751 Chr03 28201814 4e-60
CaES4763 Chr03 36140778 1e-162
CaES4765 Chr03 18412533 1e-148
CaES4772 Chr03 108911846 1e-101
CaES4773 Chr03 19866503 1e-140
CaES4782 Chr03 180624481 1e-63
CaES4785 Chr03 18620371 1e-139
CaES4786 Chr03 2767491 2e-90
CaES4791 Chr03 231378276 1e-115
CaES4796 Chr03 255599197 1e-79
CaES4804 Chr03 1339245 1e-117
CaES4809 Chr03 23694757 1e-138
CaES4815 Chr03 3928676 1e-131
CaES4819 Chr03 9240240 7e-91
CaES4826 Chr03 2330898 1e-105
CaES4827 Chr03 9826397 1e-131
CaES4831 Chr03 210082272 1e-161
CaES4838 Chr03 248603153 2e-94
CaES4842 Chr03 260980911 6e-53
CaES4869 Chr03 239726621 1e-116
CaES4878 Chr03 103316839 1e-105
CaES4897 Chr03 4731573 8e-83
CaES4899 Chr03 4301428 7e-22
CaES4919 Chr03 222834147 2e-80
CaES4930 Chr03 47684375 1e-135
CaES4946 0.0 0 Chr03 2190291 2e-82
CaES4967 Chr03 194127954 1e-139
CaES4972 Chr03 16631014 6e-82
CaES4977 Chr03 243942740 5e-80
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 651

MarkerDB | Capsicum annuum