Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr03

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 651


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES4170 Chr03 211324618 1e-116
CaES4177 Chr03 39146023 1e-101
CaES4179 Chr03 11417509 1e-161
CaES4191 Chr03 20452693 7e-76
CaES4200 Chr03 5012559 1e-100
CaES4232 Chr03 6802325 1e-130
CaES4247 Chr03 38586103 1e-102
CaES4278 Chr03 249567885 1e-106
CaES4279 Chr03 14463490 1e-127
CaES4282 Chr03 233632795 3e-93
CaES4288 Chr03 10921880 1e-121
CaES4301 Chr03 125806063 4e-99
CaES4306 Chr03 246105407 1e-143
CaES4320 Chr03 17710972 1e-80
CaES4323 Chr03 24611568 1e-130
CaES4327 Chr03 224076617 8e-85
CaES4348 Chr03 100792271 1e-131
CaES4359 Chr03 196210172 4e-77
CaES4365 Chr03 35667191 1e-132
CaES4369 Chr03 233702742 1e-137
CaES4373 Chr03 25053368 5e-80
CaES4377 Chr03 238932584 1e-112
CaES4384 Chr03 10840095 5e-49
CaES4399 Chr03 53030474 1e-103
CaES4400 Chr03 33261775 1e-101
CaES4409 Chr03 225487518 1e-144
CaES4411 Chr03 5950244 7e-75
CaES4420 Chr03 238922969 1e-131
CaES4424 Chr03 3912650 3e-81
CaES4427 Chr03 228735742 1e-118
CaES4441 Chr03 7833292 1e-119
CaES4444 Chr03 33312015 2e-60
CaES4445 Chr03 33369190 1e-130
CaES4447 Chr03 36382580 1e-121
CaES4460 Chr03 238562571 1e-143
CaES4463 Chr03 155856508 1e-121
CaES4467 Chr03 17573885 1e-108
CaES4474 Chr03 183595099 2e-85
CaES4494 Chr03 247170178 3e-89
CaES4507 Chr03 10166345 1e-128
CaES4525 Chr03 38566450 1e-150
CaES4526 Chr03 245652678 1e-81
CaES4533 Chr03 135821539 1e-130
CaES4536 Chr03 27327615 1e-137
CaES4544 Chr03 16711508 1e-119
CaES4546 Chr03 253105270 1e-119
CaES4555 Chr03 1520994 1e-77
CaES4557 Chr03 62197045 1e-129
CaES4558 Chr03 232541050 1e-122
CaES4566 Chr03 2021879 1e-132
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 651

MarkerDB | Capsicum annuum