Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr02

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 525


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES4354 Chr02 145025267 6e-98
CaES4378 Chr02 130172670 7e-81
CaES4401 Chr02 138280864 2e-82
CaES4406 Chr02 151041820 1e-154
CaES4462 Chr02 2692994 1e-95
CaES4465 Chr02 147899524 1e-114
CaES4471 Chr02 152192427 1e-108
CaES4472 Chr02 162664760 1e-117
CaES4487 Chr02 147042702 1e-70
CaES4490 Chr02 159429682 1e-117
CaES4510 Chr02 122015869 3e-89
CaES4516 Chr02 163095897 1e-140
CaES4521 Chr02 130240102 1e-100
CaES4524 Chr02 162955986 1e-146
CaES4549 Chr02 107873437 1e-129
CaES4587 Chr02 10469942 8e-68
CaES4593 Chr02 133083656 1e-103
CaES4595 Chr02 111252529 5e-87
CaES4603 Chr02 152120165 1e-156
CaES4608 Chr02 109687349 1e-138
CaES4622 Chr02 122015869 1e-77
CaES4639 Chr02 162485439 1e-135
CaES4655 Chr02 131347266 1e-151
CaES4658 Chr02 157770336 1e-119
CaES4659 Chr02 136214801 1e-124
CaES4683 Chr02 158001077 2e-67
CaES4689 Chr02 151272358 1e-140
CaES4695 Chr02 101840867 1e-136
CaES4701 Chr02 139520541 1e-113
CaES4706 Chr02 125413245 5e-59
CaES4709 Chr02 145676355 1e-124
CaES4726 Chr02 153175025 1e-121
CaES4727 Chr02 151770272 1e-130
CaES4738 Chr02 142968409 1e-130
CaES4742 Chr02 151066043 3e-55
CaES4745 Chr02 118197727 1e-129
CaES4748 Chr02 92690322 1e-53
CaES4767 Chr02 103193277 1e-131
CaES4774 Chr02 134954437 1e-128
CaES4793 Chr02 144296254 6e-96
CaES4794 Chr02 42866303 1e-125
CaES4799 Chr02 148220810 2e-70
CaES4801 Chr02 120376519 3e-38
CaES4837 Chr02 132538598 1e-107
CaES4845 Chr02 106989167 4e-62
CaES4850 Chr02 152869947 1e-128
CaES4852 Chr02 156770887 3e-80
CaES4867 Chr02 151712930 9e-46
CaES4868 Chr02 4088293 1e-121
CaES4870 Chr02 142215910 1e-114
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 525

MarkerDB | Capsicum annuum