Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr02

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 525


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES3879 Chr02 109401220 8e-72
CaES3895 Chr02 163278188 1e-114
CaES3897 Chr02 30116410 3e-62
CaES3919 Chr02 127652797 4e-56
CaES3924 Chr02 124953487 1e-123
CaES3927 Chr02 79596355 9e-75
CaES3941 Chr02 149991142 3e-99
CaES3956 Chr02 132520032 3e-79
CaES3959 Chr02 109601135 1e-131
CaES3960 Chr02 161763590 8e-97
CaES3964 Chr02 143253691 1e-130
CaES3967 Chr02 153074405 1e-127
CaES3974 Chr02 26418400 1e-115
CaES3977 Chr02 54582282 1e-93
CaES3978 Chr02 149838594 1e-169
CaES3984 Chr02 56717924 6e-86
CaES4007 Chr02 148323982 1e-124
CaES4027 Chr02 159711561 1e-128
CaES4038 Chr02 137704666 4e-87
CaES4048 Chr02 162822500 1e-69
CaES4059 Chr02 146094673 1e-135
CaES4086 Chr02 138902111 1e-137
CaES4087 Chr02 160954187 1e-145
CaES4091 Chr02 24825566 1e-127
CaES4109 Chr02 145003992 4e-86
CaES4111 Chr02 143252778 9e-85
CaES4112 Chr02 75546617 1e-120
CaES4116 Chr02 101971140 9e-96
CaES4130 Chr02 126750977 1e-160
CaES4136 Chr02 156559065 1e-109
CaES4137 Chr02 158368177 1e-127
CaES4138 Chr02 120181904 2e-81
CaES4159 Chr02 161731337 1e-126
CaES4186 Chr02 158433534 1e-130
CaES4197 Chr02 130157367 1e-125
CaES4216 Chr02 136753934 2e-56
CaES4221 Chr02 137127184 1e-108
CaES4268 Chr02 161216993 1e-133
CaES4294 Chr02 100970918 1e-121
CaES4295 Chr02 162761792 1e-128
CaES4296 Chr02 130160441 4e-59
CaES4299 Chr02 116111081 1e-139
CaES4303 Chr02 154241309 1e-131
CaES4307 Chr02 153377466 1e-137
CaES4314 Chr02 160200322 1e-149
CaES4315 Chr02 126115505 1e-92
CaES4316 Chr02 154787525 1e-106
CaES4321 Chr02 154714680 1e-128
CaES4350 Chr02 161747118 1e-127
CaES4352 Chr02 25140064 1e-135
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 525

MarkerDB | Capsicum annuum