Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr02

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 525

Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
Name Position*
CaES5463 Chr02 159473272 3e-59
CaES5464 Chr02 161032009 2e-37
CaES5467 Chr02 112091644 6e-85
CaES5469 Chr02 163286089 9e-80
CaES5482 Chr02 94493399 1e-107
CaES5499 Chr02 150783990 1e-42
CaES5506 Chr02 159574379 1e-81
CaES5519 Chr02 143500102 2e-91
CaES5534 Chr02 155756613 5e-39
CaES5540 Chr02 154773831 6e-70
CaES5553 Chr02 136255852 4e-51
CaES5555 Chr02 163567005 6e-53
CaES5562 Chr02 139205636 3e-73
CaES5563 Chr02 83003256 5e-81
CaES5566 Chr02 156745976 2e-97
CaES5581 Chr02 21464635 1e-91
CaES5595 Chr02 128214403 9e-90
CaES5598 Chr02 162364506 2e-84
CaES5624 Chr02 27077005 1e-108
CaES5626 Chr02 123588025 5e-74
CaES5652 Chr02 151450482 1e-122
CaES5667 Chr02 19109222 4e-68
CaES5704 Chr02 162132672 3e-87
CaES5709 Chr02 54209251 1e-120
CaES5721 Chr02 111479861 1e-128
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 525

MarkerDB | Capsicum annuum