Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr02

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 525


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES4873 Chr02 157353482 1e-125
CaES4885 Chr02 106973344 1e-114
CaES4886 Chr02 125493207 1e-137
CaES4900 Chr02 110132992 7e-92
CaES4902 Chr02 148281655 1e-144
CaES4908 Chr02 142082225 3e-87
CaES4918 Chr02 155911365 1e-115
CaES4920 Chr02 131046178 1e-120
CaES4939 Chr02 160887015 1e-100
CaES4941 Chr02 143603811 1e-129
CaES4942 Chr02 161537578 7e-89
CaES4944 Chr02 137874314 1e-109
CaES4951 Chr02 143963929 1e-105
CaES4978 Chr02 143837312 1e-109
CaES4982 Chr02 157313619 1e-117
CaES5024 0.0 180 Chr02 133954901 1e-150
CaES5029 Chr02 147004126 1e-119
CaES5038 Chr02 155846524 1e-29
CaES5042 Chr02 159652242 4e-99
CaES5061 Chr02 138265881 1e-114
CaES5071 Chr02 154763116 1e-133
CaES5081 Chr02 151282838 8e-80
CaES5091 Chr02 119043488 2e-96
CaES5106 Chr02 160384616 1e-139
CaES5119 Chr02 128777089 8e-85
CaES5122 Chr02 61580097 1e-131
CaES5138 Chr02 87315387 1e-153
CaES5139 Chr02 144184938 1e-159
CaES5161 Chr02 60102818 2e-98
CaES5176 Chr02 150998146 8e-73
CaES5177 Chr02 82847666 1e-112
CaES5206 Chr02 106189479 1e-113
CaES5216 Chr02 159381556 7e-73
CaES5224 Chr02 160176471 1e-121
CaES5227 Chr02 158850432 1e-133
CaES5232 Chr02 160177705 1e-116
CaES5264 Chr02 161217632 7e-95
CaES5282 Chr02 154691161 1e-117
CaES5287 Chr02 154034864 1e-66
CaES5340 Chr02 135909575 1e-105
CaES5352 Chr02 15809563 1e-105
CaES5395 Chr02 130192012 9e-83
CaES5418 Chr02 8359479 9e-64
CaES5427 Chr02 142565994 4e-85
CaES5429 Chr02 148812348 8e-95
CaES5430 Chr02 98744160 3e-78
CaES5440 Chr02 160954187 2e-79
CaES5446 Chr02 127853282 1e-34
CaES5448 Chr02 136355178 2e-31
CaES5453 Chr02 153431943 2e-94
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 525

MarkerDB | Capsicum annuum