Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr01

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 575


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES0027 Chr01 11491609 1e-133
CaES0035 Chr01 227965276 1e-112
CaES0047 Chr01 175323 1e-149
CaES0082 Chr01 226080159 1e-136
CaES0090 Chr01 185320514 1e-132
CaES0094 Chr01 105718517 4e-66
CaES0098 Chr01 165756121 4e-53
CaES0120 Chr01 29069288 1e-101
CaES0169 Chr01 174984993 1e-79
CaES0172 Chr01 122171862 1e-110
CaES0181 Chr01 1033595 3e-78
CaES0187 Chr01 284315943 2e-95
CaES0219 Chr01 234569619 5e-60
CaES0266 Chr01 2978270 2e-24
CaES0290 Chr01 44394404 1e-132
CaES0293 Chr01 1552742 1e-97
CaES0295 Chr01 182048354 2e-51
CaES0297 Chr01 89459638 1e-147
CaES0332 Chr01 182048913 1e-41
CaES0361 Chr01 171337658 1e-108
CaES0372 Chr01 1032679 5e-83
CaES0414 Chr01 229924051 1e-117
CaES0419 Chr01 60520172 2e-82
CaES0443 Chr01 229077127 1e-111
CaES0457 Chr01 232396194 6e-72
CaES0460 Chr01 5849081 4e-93
CaES0478 Chr01 168993735 1e-71
CaES0493 Chr01 182185301 3e-72
CaES0495 Chr01 231142072 2e-76
CaES0525 Chr01 230943799 1e-100
CaES0526 Chr01 170930682 1e-120
CaES0530 Chr01 7045984 1e-108
CaES0532 Chr01 297385267 7e-33
CaES0533 Chr01 218092143 8e-85
CaES0549 Chr01 223311863 1e-128
CaES0553 Chr01 296396244 1e-118
CaES0599 Chr01 39969437 1e-146
CaES0606 Chr01 2076188 7e-21
CaES0615 Chr01 16172365 1e-133
CaES0633 Chr01 77491508 1e-128
CaES0637 Chr01 5350916 3e-60
CaES0646 Chr01 109567373 1e-152
CaES0653 Chr01 11758008 1e-138
CaES0659 Chr01 226584973 1e-137
CaES0660 Chr01 18484032 1e-160
CaES0665 Chr01 7490690 1e-110
CaES0668 Chr01 23508090 1e-97
CaES0682 Chr01 203001085 1e-119
CaES0683 Chr01 24671299 2e-64
CaES0688 Chr01 151486116 1e-139
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 575


MarkerDB | Capsicum annuum