Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr01

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 575


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES0732 Chr01 174145 1e-139
CaES0047 Chr01 175323 1e-149
CaES5594 Chr01 202859 2e-85
CaES5508 Chr01 299717 5e-93
CaES4346 Chr01 578697 3e-95
CaES3995 Chr01 679419 1e-152
CaES4416 Chr01 843832 1e-109
CaES4618 Chr01 905119 4e-94
CaES3876 Chr01 974979 1e-137
CaES0372 Chr01 1032679 5e-83
CaES0181 Chr01 1033595 3e-78
CaES0812 Chr01 1377776 1e-119
CaES4917 Chr01 1505576 1e-101
CaES1325 Chr01 1529840 6e-71
CaES0293 Chr01 1552742 1e-97
CaES4082 Chr01 1564596 1e-125
CaES1868 Chr01 1605053 9e-43
CaES5075 Chr01 1736864 1e-131
CaES2391 Chr01 1736997 1e-94
CaES4532 Chr01 1967135 9e-98
CaES1378 Chr01 1969028 1e-148
CaES0606 Chr01 2076188 7e-21
CaES4435 Chr01 2504489 3e-74
CaES2964 Chr01 2553553 1e-118
CaES5076 Chr01 2557981 1e-101
CaES5016 Chr01 2602576 1e-117
CaES2133 Chr01 2645354 1e-97
CaES5072 Chr01 2762336 1e-166
CaES4034 Chr01 2907450 1e-129
CaES2237 Chr01 2907450 1e-86
CaES3789 Chr01 2945226 1e-136
CaES1080 Chr01 2946316 7e-88
CaES4563 Chr01 2962637 1e-123
CaES0266 Chr01 2978270 2e-24
CaES1956 Chr01 3128283 3e-84
CaES4849 Chr01 3164074 1e-49
CaES5432 Chr01 3273560 6e-65
CaES1504 Chr01 3692956 7e-56
CaES3070 Chr01 4193203 1e-139
CaES4670 Chr01 4227163 1e-145
CaES0769 Chr01 4248167 5e-79
CaES2229 Chr01 4430334 1e-108
CaES3275 Chr01 4943690 1e-112
CaES3242 Chr01 5084442 1e-81
CaES0637 Chr01 5350916 3e-60
CaES1370 Chr01 5510782 1e-106
CaES1265 Chr01 5834269 1e-140
CaES3042 Chr01 5845024 1e-141
CaES0460 Chr01 5849081 4e-93
CaES4534 Chr01 6076596 1e-132
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 575


MarkerDB | Capsicum annuum