Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr01

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 575


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES1768 Chr01 210442748 1e-107
CaES5443 Chr01 210443380 2e-54
CaES4205 Chr01 210987760 1e-123
CaES1114 Chr01 210993416 1e-129
CaES4456 Chr01 211539377 1e-126
CaES3755 Chr01 211542575 1e-68
CaES3693 Chr01 212718124 1e-113
CaES4830 Chr01 212741538 1e-126
CaES1706 Chr01 212752839 1e-125
CaES3972 Chr01 214511512 1e-138
CaES3266 Chr01 216630287 1e-128
CaES0533 Chr01 218092143 8e-85
CaES4396 Chr01 218092786 2e-91
CaES2162 Chr01 219857894 1e-120
CaES2675 Chr01 219907777 1e-115
CaES2535 Chr01 220014318 1e-115
CaES2334 Chr01 220153137 6e-61
CaES4888 Chr01 220289080 2e-73
CaES2830 Chr01 220303731 1e-101
CaES5361 Chr01 220628024 6e-47
CaES3261 Chr01 221065987 1e-63
CaES3109 Chr01 221675825 1e-137
CaES1951 Chr01 221686594 9e-54
CaES1180 Chr01 222603204 1e-104
CaES1226 Chr01 222755480 1e-122
CaES1879 Chr01 222756983 1e-50
CaES0549 Chr01 223311863 1e-128
CaES3152 Chr01 223900905 1e-129
CaES4453 Chr01 224151151 1e-125
CaES2423 Chr01 224152473 2e-63
CaES4389 Chr01 224193162 1e-131
CaES4741 Chr01 224317338 1e-127
CaES1849 Chr01 224476093 4e-77
CaES1094 Chr01 224847674 1e-117
CaES5400 Chr01 225309231 4e-52
CaES3491 Chr01 225340686 1e-80
CaES5174 Chr01 225476495 1e-117
CaES5004 Chr01 225965268 1e-122
CaES3265 Chr01 226077686 1e-101
CaES0082 Chr01 226080159 1e-136
CaES4058 Chr01 226093950 3e-86
CaES0742 Chr01 226303661 1e-112
CaES5564 Chr01 226584221 3e-88
CaES0659 Chr01 226584973 1e-137
CaES3175 Chr01 226652456 1e-52
CaES4808 Chr01 226653390 2e-48
CaES4717 Chr01 226728194 1e-102
CaES3018 Chr01 227514621 3e-93
CaES5487 Chr01 227865859 4e-76
CaES3980 Chr01 227870678 1e-127
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 575


MarkerDB | Capsicum annuum