Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr01

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 575


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES4152 Chr01 29360316 1e-109
CaES4162 Chr01 232242271 1e-95
CaES4187 Chr01 52527435 1e-130
CaES4202 Chr01 165758273 2e-55
CaES4204 Chr01 48770199 1e-104
CaES4205 Chr01 210987760 1e-123
CaES4210 Chr01 12836428 1e-113
CaES4211 Chr01 33407915 1e-128
CaES4223 Chr01 19990710 4e-48
CaES4229 Chr01 300770879 1e-108
CaES4234 Chr01 169557096 1e-134
CaES4238 Chr01 62467809 1e-122
CaES4249 Chr01 230082971 4e-96
CaES4252 Chr01 181423131 1e-131
CaES4257 Chr01 163602535 1e-117
CaES4265 Chr01 61322257 1e-147
CaES4270 Chr01 18482851 1e-159
CaES4273 Chr01 150373282 1e-161
CaES4274 Chr01 16291051 1e-113
CaES4277 Chr01 103340468 9e-89
CaES4333 Chr01 286703766 1e-87
CaES4342 Chr01 9111481 7e-95
CaES4346 Chr01 578697 3e-95
CaES4356 Chr01 11689697 1e-139
CaES4376 0.396 149 Chr01 123296911 6e-26
CaES4383 Chr01 130151678 1e-139
CaES4389 Chr01 224193162 1e-131
CaES4396 Chr01 218092786 2e-91
CaES4398 Chr01 210303580 1e-138
CaES4402 Chr01 62151279 1e-153
CaES4404 Chr01 70701446 2e-72
CaES4416 Chr01 843832 1e-109
CaES4418 Chr01 204125257 1e-143
CaES4434 Chr01 45313499 1e-82
CaES4435 Chr01 2504489 3e-74
CaES4437 Chr01 30015105 5e-55
CaES4446 Chr01 29808195 9e-92
CaES4453 Chr01 224151151 1e-125
CaES4456 Chr01 211539377 1e-126
CaES4475 Chr01 144771768 1e-131
CaES4476 Chr01 252079907 2e-94
CaES4492 Chr01 232292382 1e-104
CaES4493 Chr01 169999048 1e-105
CaES4500 Chr01 281083779 3e-52
CaES4502 Chr01 278454707 2e-64
CaES4514 Chr01 280987507 1e-106
CaES4532 Chr01 1967135 9e-98
CaES4534 Chr01 6076596 1e-132
CaES4545 Chr01 280674792 1e-125
CaES4552 Chr01 279958325 1e-110
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 575

MarkerDB | Capsicum annuum