Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr01

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 575


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES0169 Chr01 174984993 1e-79
CaES4805 Chr01 175177933 2e-65
CaES2980 Chr01 175247339 1e-119
CaES2149 Chr01 175657330 1e-125
CaES5056 Chr01 177228721 1e-143
CaES5729 Chr01 177274383 1e-127
CaES1611 Chr01 179172491 1e-124
CaES3503 Chr01 179877978 1e-133
CaES2745 Chr01 180679467 1e-147
CaES4252 Chr01 181423131 1e-131
CaES5307 Chr01 181465549 5e-37
CaES3400 Chr01 181781125 1e-100
CaES0295 Chr01 182048354 2e-51
CaES0332 Chr01 182048913 1e-41
CaES4996 Chr01 182086603 1e-134
CaES0493 Chr01 182185301 3e-72
CaES1277 Chr01 183905405 1e-107
CaES5536 Chr01 183915005 1e-65
CaES1978 Chr01 184023878 1e-108
CaES2122 Chr01 184435698 1e-119
CaES0735 Chr01 184973275 1e-131
CaES0090 Chr01 185320514 1e-132
CaES4592 Chr01 185362656 1e-112
CaES3512 Chr01 186680468 1e-124
CaES1751 Chr01 187417288 1e-74
CaES3759 Chr01 188526540 1e-115
CaES3595 Chr01 190313117 2e-75
CaES3877 Chr01 190930753 5e-87
CaES1113 Chr01 191565918 1e-117
CaES1925 Chr01 191595734 1e-126
CaES1301 Chr01 192155163 1e-126
CaES1021 Chr01 192439900 2e-85
CaES3260 Chr01 192596208 9e-96
CaES1562 Chr01 193627717 1e-47
CaES5750 Chr01 193819253 1e-53
CaES5372 Chr01 193819258 1e-55
CaES0705 Chr01 194084998 3e-83
CaES2087 Chr01 194496269 1e-122
CaES5339 Chr01 197083147 1e-65
CaES2212 Chr01 202768645 1e-124
CaES5416 Chr01 202991053 3e-78
CaES0682 Chr01 203001085 1e-119
CaES3717 Chr01 203001570 1e-133
CaES3598 Chr01 203232661 1e-115
CaES4418 Chr01 204125257 1e-143
CaES4981 Chr01 204952191 1e-131
CaES2250 Chr01 206171418 1e-129
CaES1143 Chr01 208535650 1e-114
CaES1527 Chr01 208581142 1e-127
CaES4398 Chr01 210303580 1e-138
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 575


MarkerDB | Capsicum annuum