Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr01

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 575


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES3711 Chr01 284237821 3e-85
CaES3717 Chr01 203001570 1e-133
CaES3724 Chr01 69868264 3e-93
CaES3727 Chr01 60606677 1e-139
CaES3730 Chr01 229003383 6e-55
CaES3732 Chr01 109496099 1e-108
CaES3743 Chr01 7048958 2e-93
CaES3755 Chr01 211542575 1e-68
CaES3759 Chr01 188526540 1e-115
CaES3778 Chr01 169577225 1e-164
CaES3789 Chr01 2945226 1e-136
CaES3795 Chr01 6946465 1e-117
CaES3797 Chr01 245475449 1e-120
CaES3861 Chr01 7012528 1e-126
CaES3876 Chr01 974979 1e-137
CaES3877 Chr01 190930753 5e-87
CaES3887 Chr01 299916822 1e-140
CaES3898 Chr01 44783902 5e-69
CaES3903 Chr01 44848538 2e-60
CaES3906 Chr01 300759335 1e-116
CaES3914 Chr01 42268212 6e-82
CaES3947 Chr01 12266097 2e-75
CaES3962 0.0 192 Chr01 44388555 1e-128
CaES3966 Chr01 15270757 1e-90
CaES3972 Chr01 214511512 1e-138
CaES3980 Chr01 227870678 1e-127
CaES3986 Chr01 281752789 1e-125
CaES3995 Chr01 679419 1e-152
CaES3999 Chr01 60443580 1e-119
CaES4000 Chr01 164599921 1e-110
CaES4005 Chr01 6562830 1e-122
CaES4006 Chr01 256561406 1e-154
CaES4014 Chr01 19571642 1e-110
CaES4015 Chr01 45128432 1e-145
CaES4021 Chr01 242709280 1e-108
CaES4032 Chr01 36582767 1e-75
CaES4034 Chr01 2907450 1e-129
CaES4035 Chr01 167369205 1e-136
CaES4042 0.0 0 Chr01 233302196 1e-126
CaES4058 Chr01 226093950 3e-86
CaES4060 Chr01 16601890 1e-110
CaES4063 Chr01 28327066 1e-147
CaES4067 Chr01 281682118 2e-68
CaES4072 0.115 191 Chr01 96291894 1e-137
CaES4082 Chr01 1564596 1e-125
CaES4098 Chr01 45927409 1e-87
CaES4114 Chr01 9351327 1e-152
CaES4119 Chr01 15567442 3e-99
CaES4145 Chr01 59385571 1e-100
CaES4151 Chr01 170079566 1e-134
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 575

MarkerDB | Capsicum annuum