Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr01

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 575


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES3175 Chr01 226652456 1e-52
CaES3203 Chr01 6681982 8e-70
CaES3241 Chr01 143639695 9e-65
CaES3242 Chr01 5084442 1e-81
CaES3251 Chr01 283809697 1e-126
CaES3260 Chr01 192596208 9e-96
CaES3261 Chr01 221065987 1e-63
CaES3262 Chr01 300307430 1e-114
CaES3265 Chr01 226077686 1e-101
CaES3266 Chr01 216630287 1e-128
CaES3275 Chr01 4943690 1e-112
CaES3277 Chr01 25581491 1e-112
CaES3293 Chr01 24044843 1e-47
CaES3316 Chr01 48664999 4e-58
CaES3330 Chr01 96258527 1e-61
CaES3333 Chr01 36253385 2e-96
CaES3334 Chr01 48074890 1e-79
CaES3335 Chr01 45158015 2e-44
CaES3339 Chr01 284395743 3e-25
CaES3342 Chr01 160014668 1e-56
CaES3364 Chr01 72547998 6e-26
CaES3368 Chr01 260163324 1e-114
CaES3375 Chr01 22301555 1e-22
CaES3376 Chr01 297936914 1e-62
CaES3400 Chr01 181781125 1e-100
CaES3408 Chr01 295024463 1e-124
CaES3418 Chr01 57218618 1e-136
CaES3419 Chr01 167432953 1e-125
CaES3431 Chr01 6946450 1e-120
CaES3436 Chr01 231003537 1e-45
CaES3449 Chr01 6728849 2e-53
CaES3465 Chr01 29737306 1e-135
CaES3476 Chr01 272074354 2e-80
CaES3491 Chr01 225340686 1e-80
CaES3503 Chr01 179877978 1e-133
CaES3512 Chr01 186680468 1e-124
CaES3529 Chr01 266692891 1e-83
CaES3534 Chr01 228449610 1e-154
CaES3551 Chr01 12533642 1e-115
CaES3556 Chr01 173159648 1e-114
CaES3572 Chr01 98959044 1e-102
CaES3594 Chr01 57173260 1e-100
CaES3595 Chr01 190313117 2e-75
CaES3598 Chr01 203232661 1e-115
CaES3609 Chr01 230083736 1e-104
CaES3614 Chr01 7557780 1e-100
CaES3619 Chr01 47508709 5e-82
CaES3629 Chr01 230060383 1e-102
CaES3669 Chr01 275315176 1e-116
CaES3693 Chr01 212718124 1e-113
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 575

MarkerDB | Capsicum annuum