Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr01

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 575


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES4273 Chr01 150373282 1e-161
CaES1348 Chr01 150373618 1e-119
CaES0688 Chr01 151486116 1e-139
CaES1976 Chr01 153714643 1e-103
CaES5357 Chr01 155086370 8e-45
CaES2096 Chr01 155358132 1e-108
CaES3342 Chr01 160014668 1e-56
CaES1980 Chr01 160611346 1e-121
CaES2214 Chr01 162803820 1e-121
CaES4257 Chr01 163602535 1e-117
CaES1435 Chr01 164599741 1e-109
CaES4000 Chr01 164599921 1e-110
CaES0731 Chr01 164599921 1e-112
CaES0098 Chr01 165756121 4e-53
CaES2240 Chr01 165756831 7e-89
CaES4202 Chr01 165758273 2e-55
CaES2551 Chr01 166913236 1e-118
CaES5637 Chr01 166945214 1e-86
CaES1644 Chr01 166946467 1e-104
CaES5393 Chr01 167109649 1e-132
CaES4035 Chr01 167369205 1e-136
CaES3419 Chr01 167432953 1e-125
CaES1677 Chr01 167603601 1e-143
CaES2658 Chr01 168013053 1e-100
CaES4994 Chr01 168729944 1e-148
CaES0478 Chr01 168993735 1e-71
CaES5291 Chr01 169110976 2e-78
CaES5525 Chr01 169403857 4e-63
CaES4234 Chr01 169557096 1e-134
CaES3778 Chr01 169577225 1e-164
CaES5472 Chr01 169669602 3e-92
CaES4970 Chr01 169674864 1e-137
CaES4493 Chr01 169999048 1e-105
CaES4151 Chr01 170079566 1e-134
CaES5683 Chr01 170166383 1e-163
CaES0526 Chr01 170930682 1e-120
CaES0361 Chr01 171337658 1e-108
CaES5631 Chr01 171536981 3e-38
CaES1412 Chr01 171591740 1e-86
CaES5288 Chr01 171690735 5e-80
CaES5725 Chr01 173130027 1e-113
CaES1241 Chr01 173146388 7e-92
CaES2770 Chr01 173147759 1e-126
CaES3556 Chr01 173159648 1e-114
CaES2812 Chr01 173384884 1e-112
CaES5635 Chr01 173610761 5e-25
CaES5235 Chr01 174979759 3e-41
CaES0169 Chr01 174984993 1e-79
CaES4805 Chr01 175177933 2e-65
CaES2980 Chr01 175247339 1e-119
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 575

MarkerDB | Capsicum annuum