Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr01

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 575


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES2714 Chr01 75969650 1e-136
CaES2717 Chr01 300811962 5e-90
CaES2736 Chr01 70749903 1e-128
CaES2743 Chr01 86733455 1e-114
CaES2745 Chr01 180679467 1e-147
CaES2749 Chr01 72499512 1e-145
CaES2760 Chr01 229885723 1e-117
CaES2769 Chr01 8630652 1e-130
CaES2770 Chr01 173147759 1e-126
CaES2781 Chr01 96631455 1e-126
CaES2798 Chr01 278243595 1e-159
CaES2808 Chr01 8323291 1e-80
CaES2812 Chr01 173384884 1e-112
CaES2830 Chr01 220303731 1e-101
CaES2836 Chr01 28229526 2e-40
CaES2842 Chr01 59691291 1e-140
CaES2845 Chr01 297912943 1e-135
CaES2848 Chr01 81393550 1e-145
CaES2878 Chr01 140944606 1e-131
CaES2887 Chr01 280987336 5e-87
CaES2926 Chr01 229886358 1e-113
CaES2935 Chr01 297570489 8e-83
CaES2943 Chr01 73763158 1e-126
CaES2958 Chr01 17005618 1e-128
CaES2959 Chr01 24672412 7e-82
CaES2964 Chr01 2553553 1e-118
CaES2980 Chr01 175247339 1e-119
CaES2982 Chr01 274770615 5e-66
CaES3001 Chr01 90672326 1e-148
CaES3006 Chr01 248910884 1e-148
CaES3016 Chr01 101565615 1e-136
CaES3018 Chr01 227514621 3e-93
CaES3023 Chr01 96767514 1e-103
CaES3041 Chr01 246116648 2e-24
CaES3042 Chr01 5845024 1e-141
CaES3056 Chr01 61307677 1e-124
CaES3061 Chr01 9151092 3e-57
CaES3062 Chr01 30307689 2e-35
CaES3070 Chr01 4193203 1e-139
CaES3105 Chr01 96765292 2e-85
CaES3109 Chr01 221675825 1e-137
CaES3110 Chr01 16720312 1e-138
CaES3111 Chr01 39970469 1e-123
CaES3136 Chr01 84400475 1e-116
CaES3137 Chr01 287770893 1e-128
CaES3145 Chr01 68080246 1e-87
CaES3146 Chr01 241479677 1e-104
CaES3152 Chr01 223900905 1e-129
CaES3164 Chr01 287169391 1e-145
CaES3165 Chr01 40574667 1e-126
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 575

MarkerDB | Capsicum annuum