Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr01

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 575


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES2637 Chr01 45729944 1e-142
CaES2287 Chr01 45736551 1e-64
CaES4671 Chr01 45807231 1e-104
CaES4098 Chr01 45927409 1e-87
CaES3619 Chr01 47508709 5e-82
CaES5589 Chr01 47744270 2e-31
CaES5516 Chr01 47744728 4e-53
CaES3334 Chr01 48074890 1e-79
CaES1346 Chr01 48095893 4e-78
CaES5002 Chr01 48102496 1e-102
CaES2536 Chr01 48233496 1e-110
CaES3316 Chr01 48664999 4e-58
CaES5548 Chr01 48693599 1e-104
CaES4204 Chr01 48770199 1e-104
CaES1207 Chr01 49127147 1e-108
CaES2008 Chr01 50820398 1e-132
CaES0902 Chr01 50830738 1e-127
CaES1361 Chr01 52477021 1e-118
CaES5743 Chr01 52487586 2e-77
CaES4187 Chr01 52527435 1e-130
CaES2425 Chr01 52895004 8e-66
CaES1902 Chr01 55807083 1e-118
CaES5623 Chr01 56098526 4e-86
CaES1197 Chr01 56099127 6e-60
CaES3594 Chr01 57173260 1e-100
CaES3418 Chr01 57218618 1e-136
CaES1717 Chr01 58130387 1e-115
CaES4145 Chr01 59385571 1e-100
CaES4798 Chr01 59661571 1e-120
CaES2842 Chr01 59691291 1e-140
CaES3999 Chr01 60443580 1e-119
CaES0419 Chr01 60520172 2e-82
CaES3727 Chr01 60606677 1e-139
CaES1971 Chr01 61227457 1e-61
CaES3056 Chr01 61307677 1e-124
CaES4265 Chr01 61322257 1e-147
CaES4402 Chr01 62151279 1e-153
CaES1940 Chr01 62161490 1e-132
CaES1630 Chr01 62355391 1e-83
CaES4238 Chr01 62467809 1e-122
CaES0997 Chr01 63381579 8e-71
CaES4619 Chr01 64728808 1e-141
CaES3145 Chr01 68080246 1e-87
CaES1120 Chr01 69848592 7e-49
CaES3724 Chr01 69868264 3e-93
CaES1922 Chr01 69894150 1e-102
CaES4404 Chr01 70701446 2e-72
CaES2708 Chr01 70749661 1e-143
CaES2736 Chr01 70749903 1e-128
CaES5160 Chr01 71403513 2e-22
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 575


MarkerDB | Capsicum annuum