Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr01

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 575


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES2149 Chr01 175657330 1e-125
CaES2154 Chr01 231007898 4e-50
CaES2162 Chr01 219857894 1e-120
CaES2163 Chr01 299227504 7e-61
CaES2166 Chr01 298753695 1e-120
CaES2174 Chr01 45686146 4e-89
CaES2181 Chr01 31428878 9e-73
CaES2198 Chr01 22183160 1e-108
CaES2212 Chr01 202768645 1e-124
CaES2214 Chr01 162803820 1e-121
CaES2229 Chr01 4430334 1e-108
CaES2230 Chr01 6286728 1e-103
CaES2237 Chr01 2907450 1e-86
CaES2240 Chr01 165756831 7e-89
CaES2250 Chr01 206171418 1e-129
CaES2254 Chr01 16596841 3e-88
CaES2255 Chr01 129454147 1e-103
CaES2261 Chr01 29192943 1e-125
CaES2271 Chr01 128210904 1e-143
CaES2287 Chr01 45736551 1e-64
CaES2306 0.0 0 Chr01 18052587 1e-131
CaES2325 Chr01 14593824 1e-119
CaES2334 Chr01 220153137 6e-61
CaES2391 Chr01 1736997 1e-94
CaES2407 Chr01 36610985 1e-118
CaES2416 Chr01 228084868 5e-95
CaES2423 Chr01 224152473 2e-63
CaES2425 Chr01 52895004 8e-66
CaES2454 Chr01 149754717 6e-60
CaES2458 Chr01 44365355 1e-102
CaES2470 Chr01 232192871 1e-78
CaES2474 Chr01 232192880 5e-80
CaES2482 Chr01 19544681 4e-94
CaES2485 Chr01 252079811 1e-65
CaES2511 Chr01 16053789 1e-103
CaES2535 Chr01 220014318 1e-115
CaES2536 Chr01 48233496 1e-110
CaES2537 Chr01 16171840 1e-57
CaES2540 Chr01 35298263 1e-111
CaES2551 Chr01 166913236 1e-118
CaES2552 Chr01 276095315 5e-94
CaES2555 Chr01 240948246 1e-117
CaES2557 Chr01 30453014 1e-102
CaES2625 Chr01 6468094 6e-86
CaES2631 Chr01 14810389 4e-68
CaES2637 Chr01 45729944 1e-142
CaES2658 Chr01 168013053 1e-100
CaES2675 Chr01 219907777 1e-115
CaES2706 Chr01 112872795 9e-57
CaES2708 Chr01 70749661 1e-143
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 575

MarkerDB | Capsicum annuum