Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr01

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 575


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES4063 Chr01 28327066 1e-147
CaES1029 Chr01 28848546 1e-154
CaES0120 Chr01 29069288 1e-101
CaES2261 Chr01 29192943 1e-125
CaES5100 Chr01 29193672 2e-79
CaES1481 Chr01 29203635 2e-72
CaES4152 Chr01 29360316 1e-109
CaES3465 Chr01 29737306 1e-135
CaES1174 Chr01 29738318 1e-124
CaES4446 Chr01 29808195 9e-92
CaES5494 Chr01 30014319 1e-76
CaES0694 Chr01 30014319 1e-125
CaES4437 Chr01 30015105 5e-55
CaES3062 Chr01 30307689 2e-35
CaES2557 Chr01 30453014 1e-102
CaES1590 Chr01 30453587 2e-76
CaES0782 Chr01 30765370 3e-83
CaES2014 Chr01 31422929 1e-121
CaES2181 Chr01 31428878 9e-73
CaES5069 Chr01 31464941 1e-114
CaES5517 Chr01 31464944 4e-46
CaES0991 Chr01 32197825 1e-101
CaES4211 Chr01 33407915 1e-128
CaES2540 Chr01 35298263 1e-111
CaES3333 Chr01 36253385 2e-96
CaES2079 Chr01 36572925 2e-96
CaES4032 Chr01 36582767 1e-75
CaES0696 Chr01 36590110 4e-67
CaES2407 Chr01 36610985 1e-118
CaES4698 Chr01 37458050 2e-95
CaES0599 Chr01 39969437 1e-146
CaES3111 Chr01 39970469 1e-123
CaES3165 Chr01 40574667 1e-126
CaES3914 Chr01 42268212 6e-82
CaES2075 Chr01 43009752 1e-155
CaES2458 Chr01 44365355 1e-102
CaES0290 Chr01 44394404 1e-132
CaES3898 Chr01 44783902 5e-69
CaES1736 Chr01 44799495 1e-112
CaES3903 Chr01 44848538 2e-60
CaES1440 Chr01 45085866 5e-44
CaES5485 Chr01 45113907 2e-57
CaES4015 Chr01 45128432 1e-145
CaES3335 Chr01 45158015 2e-44
CaES0774 Chr01 45176267 2e-88
CaES2104 Chr01 45176279 1e-110
CaES4434 Chr01 45313499 1e-82
CaES2100 Chr01 45574606 2e-94
CaES2174 Chr01 45686146 4e-89
CaES5137 Chr01 45728044 1e-106
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 575


MarkerDB | Capsicum annuum