Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr01

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 575


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES1614 Chr01 18347449 1e-138
CaES1630 Chr01 62355391 1e-83
CaES1644 Chr01 166946467 1e-104
CaES1677 Chr01 167603601 1e-143
CaES1683 Chr01 140795341 1e-33
CaES1684 Chr01 240826796 8e-84
CaES1689 Chr01 240948946 3e-91
CaES1696 Chr01 139510505 1e-116
CaES1706 Chr01 212752839 1e-125
CaES1717 Chr01 58130387 1e-115
CaES1720 Chr01 12676168 7e-69
CaES1727 Chr01 21350324 3e-80
CaES1736 Chr01 44799495 1e-112
CaES1751 Chr01 187417288 1e-74
CaES1768 Chr01 210442748 1e-107
CaES1774 Chr01 16171693 2e-28
CaES1830 Chr01 299871248 1e-161
CaES1831 Chr01 139534049 2e-81
CaES1840 Chr01 272641179 1e-110
CaES1849 Chr01 224476093 4e-77
CaES1868 Chr01 1605053 9e-43
CaES1877 Chr01 230147497 1e-117
CaES1879 Chr01 222756983 1e-50
CaES1902 Chr01 55807083 1e-118
CaES1922 Chr01 69894150 1e-102
CaES1925 Chr01 191595734 1e-126
CaES1935 Chr01 12263818 1e-132
CaES1940 Chr01 62161490 1e-132
CaES1951 Chr01 221686594 9e-54
CaES1956 Chr01 3128283 3e-84
CaES1971 Chr01 61227457 1e-61
CaES1976 Chr01 153714643 1e-103
CaES1978 Chr01 184023878 1e-108
CaES1980 Chr01 160611346 1e-121
CaES1990 Chr01 294968464 1e-119
CaES2008 Chr01 50820398 1e-132
CaES2014 Chr01 31422929 1e-121
CaES2049 Chr01 113483805 1e-129
CaES2058 Chr01 6926267 3e-96
CaES2075 Chr01 43009752 1e-155
CaES2079 Chr01 36572925 2e-96
CaES2087 Chr01 194496269 1e-122
CaES2096 Chr01 155358132 1e-108
CaES2100 Chr01 45574606 2e-94
CaES2104 Chr01 45176279 1e-110
CaES2105 Chr01 21891210 5e-67
CaES2106 Chr01 285612184 1e-130
CaES2122 Chr01 184435698 1e-119
CaES2133 Chr01 2645354 1e-97
CaES2148 Chr01 144769111 2e-55
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 575

MarkerDB | Capsicum annuum