Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr01

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 575


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES3947 Chr01 12266097 2e-75
CaES3551 Chr01 12533642 1e-115
CaES1720 Chr01 12676168 7e-69
CaES4210 Chr01 12836428 1e-113
CaES1153 Chr01 12893647 3e-98
CaES0790 Chr01 13714975 2e-59
CaES5047 Chr01 14380919 1e-97
CaES2325 Chr01 14593824 1e-119
CaES5557 Chr01 14671345 3e-80
CaES2631 Chr01 14810389 4e-68
CaES3966 Chr01 15270757 1e-90
CaES4119 Chr01 15567442 3e-99
CaES4803 Chr01 16053525 1e-131
CaES2511 Chr01 16053789 1e-103
CaES1123 Chr01 16171693 9e-78
CaES1774 Chr01 16171693 2e-28
CaES2537 Chr01 16171840 1e-57
CaES0615 Chr01 16172365 1e-133
CaES4274 Chr01 16291051 1e-113
CaES1604 Chr01 16542906 1e-107
CaES2254 Chr01 16596841 3e-88
CaES4060 Chr01 16601890 1e-110
CaES3110 Chr01 16720312 1e-138
CaES2958 Chr01 17005618 1e-128
CaES1037 Chr01 17353337 7e-75
CaES0998 Chr01 17735867 1e-69
CaES1614 Chr01 18347449 1e-138
CaES4270 Chr01 18482851 1e-159
CaES0660 Chr01 18484032 1e-160
CaES1363 Chr01 18826094 2e-91
CaES2482 Chr01 19544681 4e-94
CaES4014 Chr01 19571642 1e-110
CaES4223 Chr01 19990710 4e-48
CaES1727 Chr01 21350324 3e-80
CaES2105 Chr01 21891210 5e-67
CaES5588 Chr01 21950348 5e-88
CaES2198 Chr01 22183160 1e-108
CaES4611 Chr01 22222312 1e-131
CaES3375 Chr01 22301555 1e-22
CaES0668 Chr01 23508090 1e-97
CaES4781 Chr01 23833958 1e-128
CaES0969 Chr01 23843863 1e-133
CaES3293 Chr01 24044843 1e-47
CaES5212 Chr01 24044939 5e-45
CaES0683 Chr01 24671299 2e-64
CaES2959 Chr01 24672412 7e-82
CaES3277 Chr01 25581491 1e-112
CaES5151 Chr01 26711945 5e-71
CaES5466 Chr01 27560497 3e-61
CaES2836 Chr01 28229526 2e-40
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 575


MarkerDB | Capsicum annuum