Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr01

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 575


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES1173 Chr01 9426831 1e-145
CaES1174 Chr01 29738318 1e-124
CaES1177 Chr01 7073326 1e-152
CaES1180 Chr01 222603204 1e-104
CaES1197 Chr01 56099127 6e-60
CaES1204 Chr01 7366460 1e-111
CaES1207 Chr01 49127147 1e-108
CaES1209 Chr01 280702699 1e-120
CaES1214 Chr01 275266402 1e-86
CaES1225 Chr01 282039110 5e-95
CaES1226 Chr01 222755480 1e-122
CaES1228 Chr01 300242277 2e-26
CaES1241 Chr01 173146388 7e-92
CaES1263 Chr01 6848590 1e-110
CaES1265 Chr01 5834269 1e-140
CaES1277 Chr01 183905405 1e-107
CaES1279 Chr01 256439100 1e-120
CaES1293 Chr01 231140478 1e-123
CaES1301 Chr01 192155163 1e-126
CaES1319 Chr01 140792688 1e-139
CaES1325 Chr01 1529840 6e-71
CaES1329 Chr01 9897414 1e-131
CaES1346 Chr01 48095893 4e-78
CaES1348 Chr01 150373618 1e-119
CaES1349 Chr01 265612340 8e-80
CaES1361 Chr01 52477021 1e-118
CaES1363 Chr01 18826094 2e-91
CaES1370 Chr01 5510782 1e-106
CaES1378 Chr01 1969028 1e-148
CaES1397 Chr01 276071057 5e-89
CaES1410 Chr01 7531585 4e-46
CaES1412 Chr01 171591740 1e-86
CaES1421 Chr01 231169963 1e-125
CaES1435 Chr01 164599741 1e-109
CaES1440 Chr01 45085866 5e-44
CaES1443 Chr01 11571336 5e-65
CaES1445 Chr01 8627431 1e-110
CaES1481 Chr01 29203635 2e-72
CaES1483 Chr01 148772880 3e-99
CaES1503 Chr01 9973635 1e-100
CaES1504 Chr01 3692956 7e-56
CaES1509 Chr01 10930868 1e-73
CaES1527 Chr01 208581142 1e-127
CaES1562 Chr01 193627717 1e-47
CaES1569 Chr01 267970947 1e-96
CaES1590 Chr01 30453587 2e-76
CaES1592 Chr01 267971248 3e-94
CaES1595 Chr01 232440495 6e-99
CaES1604 Chr01 16542906 1e-107
CaES1611 Chr01 179172491 1e-124
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 575

MarkerDB | Capsicum annuum