Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr01

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 575


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES3242 Chr01 5084442 1e-81
CaES0637 Chr01 5350916 3e-60
CaES1370 Chr01 5510782 1e-106
CaES1265 Chr01 5834269 1e-140
CaES3042 Chr01 5845024 1e-141
CaES0460 Chr01 5849081 4e-93
CaES4534 Chr01 6076596 1e-132
CaES1157 Chr01 6158586 1e-116
CaES2230 Chr01 6286728 1e-103
CaES1104 Chr01 6343328 1e-150
CaES2625 Chr01 6468094 6e-86
CaES4005 Chr01 6562830 1e-122
CaES3203 Chr01 6681982 8e-70
CaES3449 Chr01 6728849 2e-53
CaES1263 Chr01 6848590 1e-110
CaES2058 Chr01 6926267 3e-96
CaES3431 Chr01 6946450 1e-120
CaES3795 Chr01 6946465 1e-117
CaES3861 Chr01 7012528 1e-126
CaES0530 Chr01 7045984 1e-108
CaES3743 Chr01 7048958 2e-93
CaES1177 Chr01 7073326 1e-152
CaES5486 Chr01 7285947 1e-59
CaES1204 Chr01 7366460 1e-111
CaES0665 Chr01 7490690 1e-110
CaES1410 Chr01 7531585 4e-46
CaES3614 Chr01 7557780 1e-100
CaES5509 Chr01 7862444 2e-96
CaES5060 Chr01 8072226 3e-27
CaES4588 Chr01 8135931 6e-83
CaES2808 Chr01 8323291 1e-80
CaES1445 Chr01 8627431 1e-110
CaES2769 Chr01 8630652 1e-130
CaES5074 Chr01 9110730 1e-104
CaES4342 Chr01 9111481 7e-95
CaES3061 Chr01 9151092 3e-57
CaES4114 Chr01 9351327 1e-152
CaES1173 Chr01 9426831 1e-145
CaES4986 Chr01 9808590 1e-133
CaES1329 Chr01 9897414 1e-131
CaES0729 Chr01 9972805 1e-117
CaES1503 Chr01 9973635 1e-100
CaES5582 Chr01 10032705 1e-27
CaES1509 Chr01 10930868 1e-73
CaES0027 Chr01 11491609 1e-133
CaES1443 Chr01 11571336 5e-65
CaES4356 Chr01 11689697 1e-139
CaES4736 Chr01 11697187 4e-97
CaES0653 Chr01 11758008 1e-138
CaES1935 Chr01 12263818 1e-132
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 575


MarkerDB | Capsicum annuum