Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr01

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 575


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES5582 Chr01 10032705 1e-27
CaES5588 Chr01 21950348 5e-88
CaES5589 Chr01 47744270 2e-31
CaES5594 Chr01 202859 2e-85
CaES5603 Chr01 282762809 4e-61
CaES5608 Chr01 297874411 1e-70
CaES5614 Chr01 86258197 1e-113
CaES5623 Chr01 56098526 4e-86
CaES5631 Chr01 171536981 3e-38
CaES5635 Chr01 173610761 5e-25
CaES5637 Chr01 166945214 1e-86
CaES5645 Chr01 111529089 1e-102
CaES5656 Chr01 229317153 3e-92
CaES5677 Chr01 73545412 1e-144
CaES5683 Chr01 170166383 1e-163
CaES5685 0.0 0 Chr01 296630664 1e-139
CaES5707 Chr01 300759263 1e-131
CaES5725 Chr01 173130027 1e-113
CaES5729 Chr01 177274383 1e-127
CaES5731 Chr01 228366545 7e-63
CaES5735 Chr01 249658895 3e-31
CaES5743 Chr01 52487586 2e-77
CaES5745 Chr01 298785335 3e-75
CaES5750 Chr01 193819253 1e-53
CaES5751 Chr01 77918612 1e-66
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 575

MarkerDB | Capsicum annuum