Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr01

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 575


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES3006 Chr01 248910884 1e-148
CaES5735 Chr01 249658895 3e-31
CaES2485 Chr01 252079811 1e-65
CaES4476 Chr01 252079907 2e-94
CaES1279 Chr01 256439100 1e-120
CaES4006 Chr01 256561406 1e-154
CaES3368 Chr01 260163324 1e-114
CaES5434 Chr01 260977076 1e-30
CaES1349 Chr01 265612340 8e-80
CaES3529 Chr01 266692891 1e-83
CaES1569 Chr01 267970947 1e-96
CaES1592 Chr01 267971248 3e-94
CaES3476 Chr01 272074354 2e-80
CaES1840 Chr01 272641179 1e-110
CaES2982 Chr01 274770615 5e-66
CaES1214 Chr01 275266402 1e-86
CaES3669 Chr01 275315176 1e-116
CaES5248 Chr01 275385408 2e-98
CaES1397 Chr01 276071057 5e-89
CaES2552 Chr01 276095315 5e-94
CaES2798 Chr01 278243595 1e-159
CaES4502 Chr01 278454707 2e-64
CaES4552 Chr01 279958325 1e-110
CaES4545 Chr01 280674792 1e-125
CaES1209 Chr01 280702699 1e-120
CaES2887 Chr01 280987336 5e-87
CaES4514 Chr01 280987507 1e-106
CaES4747 Chr01 280987510 1e-140
CaES5040 Chr01 280987901 5e-35
CaES1111 Chr01 281083046 1e-120
CaES4500 Chr01 281083779 3e-52
CaES4067 Chr01 281682118 2e-68
CaES3986 Chr01 281752789 1e-125
CaES1225 Chr01 282039110 5e-95
CaES5603 Chr01 282762809 4e-61
CaES3251 Chr01 283809697 1e-126
CaES0717 Chr01 283860010 8e-73
CaES4743 Chr01 283864545 1e-125
CaES0946 Chr01 284139206 1e-113
CaES5008 Chr01 284236021 2e-80
CaES3711 Chr01 284237821 3e-85
CaES0187 Chr01 284315943 2e-95
CaES3339 Chr01 284395743 3e-25
CaES4661 Chr01 284434103 1e-110
CaES5086 Chr01 285493987 1e-149
CaES2106 Chr01 285612184 1e-130
CaES4333 Chr01 286703766 1e-87
CaES3164 Chr01 287169391 1e-145
CaES3137 Chr01 287770893 1e-128
CaES1990 Chr01 294968464 1e-119
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 575


MarkerDB | Capsicum annuum