Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr01

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 575


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES5075 Chr01 1736864 1e-131
CaES5076 Chr01 2557981 1e-101
CaES5086 Chr01 285493987 1e-149
CaES5100 Chr01 29193672 2e-79
CaES5137 Chr01 45728044 1e-106
CaES5151 Chr01 26711945 5e-71
CaES5160 Chr01 71403513 2e-22
CaES5174 Chr01 225476495 1e-117
CaES5180 Chr01 149370498 1e-131
CaES5190 Chr01 133321611 1e-124
CaES5212 Chr01 24044939 5e-45
CaES5235 Chr01 174979759 3e-41
CaES5248 Chr01 275385408 2e-98
CaES5278 Chr01 82167574 1e-104
CaES5288 Chr01 171690735 5e-80
CaES5291 Chr01 169110976 2e-78
CaES5292 Chr01 110498362 1e-134
CaES5307 Chr01 181465549 5e-37
CaES5317 Chr01 147066602 4e-56
CaES5318 Chr01 112683972 8e-41
CaES5335 Chr01 230177092 1e-87
CaES5339 Chr01 197083147 1e-65
CaES5349 Chr01 299529699 3e-40
CaES5357 Chr01 155086370 8e-45
CaES5361 Chr01 220628024 6e-47
CaES5372 Chr01 193819258 1e-55
CaES5393 Chr01 167109649 1e-132
CaES5400 Chr01 225309231 4e-52
CaES5416 Chr01 202991053 3e-78
CaES5421 Chr01 246337051 1e-87
CaES5432 Chr01 3273560 6e-65
CaES5434 Chr01 260977076 1e-30
CaES5443 Chr01 210443380 2e-54
CaES5456 Chr01 229923856 7e-63
CaES5466 Chr01 27560497 3e-61
CaES5472 Chr01 169669602 3e-92
CaES5485 Chr01 45113907 2e-57
CaES5486 Chr01 7285947 1e-59
CaES5487 Chr01 227865859 4e-76
CaES5494 Chr01 30014319 1e-76
CaES5508 Chr01 299717 5e-93
CaES5509 Chr01 7862444 2e-96
CaES5516 Chr01 47744728 4e-53
CaES5517 Chr01 31464944 4e-46
CaES5525 Chr01 169403857 4e-63
CaES5536 Chr01 183915005 1e-65
CaES5548 Chr01 48693599 1e-104
CaES5557 Chr01 14671345 3e-80
CaES5564 Chr01 226584221 3e-88
CaES5576 Chr01 227934056 1e-103
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 575

MarkerDB | Capsicum annuum