Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr01

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 575


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES0857 Chr01 227908873 1e-120
CaES5058 Chr01 227933864 1e-128
CaES5576 Chr01 227934056 1e-103
CaES0035 Chr01 227965276 1e-112
CaES2416 Chr01 228084868 5e-95
CaES5731 Chr01 228366545 7e-63
CaES3534 Chr01 228449610 1e-154
CaES4567 Chr01 228755083 1e-105
CaES0866 Chr01 228807663 1e-145
CaES3730 Chr01 229003383 6e-55
CaES0443 Chr01 229077127 1e-111
CaES5656 Chr01 229317153 3e-92
CaES0909 Chr01 229432695 1e-122
CaES4562 Chr01 229516400 1e-131
CaES2760 Chr01 229885723 1e-117
CaES2926 Chr01 229886358 1e-113
CaES5456 Chr01 229923856 7e-63
CaES0414 Chr01 229924051 1e-117
CaES4652 Chr01 229933906 9e-37
CaES3629 Chr01 230060383 1e-102
CaES4249 Chr01 230082971 4e-96
CaES3609 Chr01 230083736 1e-104
CaES1877 Chr01 230147497 1e-117
CaES5335 Chr01 230177092 1e-87
CaES0726 Chr01 230568429 1e-100
CaES0525 Chr01 230943799 1e-100
CaES3436 Chr01 231003537 1e-45
CaES2154 Chr01 231007898 4e-50
CaES1293 Chr01 231140478 1e-123
CaES0495 Chr01 231142072 2e-76
CaES1421 Chr01 231169963 1e-125
CaES1108 Chr01 231862207 1e-134
CaES2470 Chr01 232192871 1e-78
CaES2474 Chr01 232192880 5e-80
CaES0822 Chr01 232217221 4e-80
CaES4162 Chr01 232242271 1e-95
CaES4492 Chr01 232292382 1e-104
CaES0457 Chr01 232396194 6e-72
CaES1595 Chr01 232440495 6e-99
CaES0219 Chr01 234569619 5e-60
CaES1684 Chr01 240826796 8e-84
CaES2555 Chr01 240948246 1e-117
CaES1689 Chr01 240948946 3e-91
CaES3146 Chr01 241479677 1e-104
CaES4021 Chr01 242709280 1e-108
CaES0813 Chr01 243834973 1e-110
CaES3797 Chr01 245475449 1e-120
CaES3041 Chr01 246116648 2e-24
CaES5421 Chr01 246337051 1e-87
CaES4578 Chr01 248910588 1e-141
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 575


MarkerDB | Capsicum annuum