Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr01

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 575


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES4562 Chr01 229516400 1e-131
CaES4563 Chr01 2962637 1e-123
CaES4567 Chr01 228755083 1e-105
CaES4578 Chr01 248910588 1e-141
CaES4588 Chr01 8135931 6e-83
CaES4592 Chr01 185362656 1e-112
CaES4611 Chr01 22222312 1e-131
CaES4618 Chr01 905119 4e-94
CaES4619 Chr01 64728808 1e-141
CaES4652 Chr01 229933906 9e-37
CaES4661 Chr01 284434103 1e-110
CaES4663 Chr01 102168862 3e-92
CaES4670 Chr01 4227163 1e-145
CaES4671 Chr01 45807231 1e-104
CaES4698 Chr01 37458050 2e-95
CaES4717 Chr01 226728194 1e-102
CaES4736 Chr01 11697187 4e-97
CaES4741 Chr01 224317338 1e-127
CaES4743 Chr01 283864545 1e-125
CaES4747 Chr01 280987510 1e-140
CaES4771 Chr01 295046165 1e-141
CaES4781 Chr01 23833958 1e-128
CaES4798 Chr01 59661571 1e-120
CaES4803 Chr01 16053525 1e-131
CaES4805 Chr01 175177933 2e-65
CaES4808 Chr01 226653390 2e-48
CaES4830 Chr01 212741538 1e-126
CaES4849 Chr01 3164074 1e-49
CaES4888 Chr01 220289080 2e-73
CaES4917 Chr01 1505576 1e-101
CaES4938 Chr01 299155047 3e-96
CaES4960 Chr01 95831287 1e-166
CaES4970 Chr01 169674864 1e-137
CaES4981 Chr01 204952191 1e-131
CaES4986 Chr01 9808590 1e-133
CaES4994 Chr01 168729944 1e-148
CaES4995 Chr01 297564481 1e-57
CaES4996 Chr01 182086603 1e-134
CaES5002 Chr01 48102496 1e-102
CaES5004 Chr01 225965268 1e-122
CaES5008 Chr01 284236021 2e-80
CaES5016 Chr01 2602576 1e-117
CaES5040 Chr01 280987901 5e-35
CaES5047 Chr01 14380919 1e-97
CaES5056 Chr01 177228721 1e-143
CaES5058 Chr01 227933864 1e-128
CaES5060 Chr01 8072226 3e-27
CaES5069 Chr01 31464941 1e-114
CaES5072 Chr01 2762336 1e-166
CaES5074 Chr01 9110730 1e-104
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 575

MarkerDB | Capsicum annuum