Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr00

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 604


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES0009 Chr00 494784781 2e-96
CaES0030 Chr00 527101080 1e-82
CaES0041 Chr00 452245032 1e-28
CaES0049 Chr00 544464356 3e-92
CaES0061 Chr00 188728898 3e-96
CaES0063 Chr00 473248998 1e-129
CaES0065 Chr00 487364598 5e-82
CaES0068 Chr00 575012881 1e-128
CaES0074 Chr00 187902330 1e-53
CaES0106 Chr00 669639843 1e-131
CaES0108 Chr00 596945333 5e-46
CaES0124 Chr00 572785990 1e-108
CaES0147 Chr00 185927804 7e-87
CaES0175 Chr00 156527457 4e-42
CaES0182 Chr00 281503643 1e-111
CaES0199 Chr00 211652547 1e-110
CaES0228 Chr00 283633512 1e-107
CaES0229 Chr00 684285111 1e-117
CaES0234 Chr00 630650334 1e-116
CaES0243 Chr00 634172585 1e-107
CaES0256 Chr00 250472594 1e-120
CaES0258 Chr00 226497315 1e-39
CaES0265 Chr00 524702919 4e-40
CaES0273 Chr00 669118178 1e-119
CaES0274 Chr00 197216092 4e-95
CaES0305 Chr00 268674295 1e-132
CaES0322 Chr00 374742142 4e-83
CaES0324 Chr00 308448158 6e-66
CaES0345 Chr00 293946991 1e-108
CaES0354 Chr00 539117709 2e-50
CaES0365 Chr00 580340495 1e-63
CaES0366 Chr00 525070762 1e-102
CaES0368 Chr00 545023527 1e-127
CaES0388 Chr00 561465183 1e-139
CaES0391 Chr00 655854329 1e-113
CaES0408 Chr00 420041665 1e-143
CaES0412 Chr00 495011414 1e-139
CaES0417 Chr00 530418212 1e-124
CaES0421 Chr00 629105943 1e-100
CaES0425 0.35 192 Chr00 607950180 2e-92
CaES0440 Chr00 473383055 1e-110
CaES0451 Chr00 503225364 3e-62
CaES0464 Chr00 422317407 1e-119
CaES0465 Chr00 174566301 1e-104
CaES0466 Chr00 538409186 1e-126
CaES0489 Chr00 440680500 1e-80
CaES0490 Chr00 435712430 3e-43
CaES0505 Chr00 320424208 5e-62
CaES0512 Chr00 685608746 1e-48
CaES0514 Chr00 309337574 7e-55
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 604

MarkerDB | Capsicum annuum