Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr00

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 604


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES0791 Chr00 97546262 2e-40
CaES4479 Chr00 99625420 6e-41
CaES4124 Chr00 101631787 3e-50
CaES3939 Chr00 110693187 2e-32
CaES3429 Chr00 117039886 2e-62
CaES4423 Chr00 132227239 1e-29
CaES3291 Chr00 136739022 2e-53
CaES4959 Chr00 136739022 1e-71
CaES0748 Chr00 143835313 1e-67
CaES0935 Chr00 145519174 1e-110
CaES5691 Chr00 154179092 3e-99
CaES4028 Chr00 155090293 3e-91
CaES2724 Chr00 156477149 1e-67
CaES0175 Chr00 156527457 4e-42
CaES4833 Chr00 157427853 5e-96
CaES2339 Chr00 159867800 8e-76
CaES2834 Chr00 159984144 2e-69
CaES1333 Chr00 165342955 3e-66
CaES3998 Chr00 165720589 2e-97
CaES5150 Chr00 166980633 3e-46
CaES4451 Chr00 167602259 2e-66
CaES4540 Chr00 168640565 4e-58
CaES4428 Chr00 168812614 1e-116
CaES2011 Chr00 170027590 1e-92
CaES2016 Chr00 170090445 3e-96
CaES0733 Chr00 170123855 1e-101
CaES1315 Chr00 171902991 1e-102
CaES1482 Chr00 174178031 3e-50
CaES1459 Chr00 174561333 1e-123
CaES0465 Chr00 174566301 1e-104
CaES4821 Chr00 174713435 7e-75
CaES2550 Chr00 174827899 1e-133
CaES1377 Chr00 175015221 1e-85
CaES5164 Chr00 177393691 8e-60
CaES2859 Chr00 180975936 1e-140
CaES2710 Chr00 181108437 1e-109
CaES4935 Chr00 183024030 5e-82
CaES4985 Chr00 184872364 1e-119
CaES5442 Chr00 185479697 6e-59
CaES2372 Chr00 185479745 1e-152
CaES0772 Chr00 185528535 1e-134
CaES0147 Chr00 185927804 7e-87
CaES5404 Chr00 186110298 3e-32
CaES1188 Chr00 186549387 7e-91
CaES0074 Chr00 187902330 1e-53
CaES0061 Chr00 188728898 3e-96
CaES4641 Chr00 188969974 1e-128
CaES2216 Chr00 190426871 1e-133
CaES3435 Chr00 192691432 1e-121
CaES1741 Chr00 192845775 1e-65
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 604

MarkerDB | Capsicum annuum