Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr00

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 604


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES3723 Chr00 672717478 1e-121
CaES3725 Chr00 240848858 1e-115
CaES3739 Chr00 603568717 3e-79
CaES3748 Chr00 482982443 1e-114
CaES3749 Chr00 538762230 1e-125
CaES3770 Chr00 435719410 1e-146
CaES3786 Chr00 461883385 1e-111
CaES3825 Chr00 300362105 4e-76
CaES3832 Chr00 205314720 8e-49
CaES3834 Chr00 558430452 6e-83
CaES3848 Chr00 705109954 1e-110
CaES3851 Chr00 669656117 3e-97
CaES3871 Chr00 544834360 1e-72
CaES3878 Chr00 480781681 1e-128
CaES3884 Chr00 604437148 1e-123
CaES3888 Chr00 606631118 1e-151
CaES3899 Chr00 574635965 1e-124
CaES3905 Chr00 480796510 1e-110
CaES3922 Chr00 655456674 8e-76
CaES3925 Chr00 591638260 1e-139
CaES3939 Chr00 110693187 2e-32
CaES3945 Chr00 487286837 3e-78
CaES3957 Chr00 459648579 4e-66
CaES3958 0.367 192 Chr00 666278826 1e-146
CaES3965 Chr00 714674520 3e-90
CaES3970 Chr00 508416455 1e-129
CaES3976 Chr00 300650833 7e-62
CaES3998 Chr00 165720589 2e-97
CaES4024 Chr00 560904891 2e-95
CaES4028 Chr00 155090293 3e-91
CaES4030 Chr00 467093967 1e-118
CaES4031 Chr00 221306937 5e-69
CaES4039 Chr00 662495463 1e-133
CaES4046 Chr00 563204839 1e-139
CaES4071 Chr00 199939627 1e-121
CaES4076 Chr00 580304266 2e-98
CaES4081 Chr00 258035703 1e-135
CaES4088 Chr00 662494604 1e-100
CaES4093 Chr00 575051318 1e-131
CaES4100 Chr00 560304656 2e-60
CaES4103 Chr00 303357541 1e-115
CaES4104 Chr00 695694561 1e-127
CaES4124 Chr00 101631787 3e-50
CaES4131 Chr00 340183557 1e-150
CaES4132 Chr00 503379089 1e-144
CaES4139 Chr00 401451791 4e-48
CaES4140 Chr00 462550106 1e-125
CaES4147 Chr00 628615910 1e-112
CaES4167 Chr00 501588347 1e-117
CaES4174 Chr00 705460461 1e-111
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 604

MarkerDB | Capsicum annuum